Miniature inverted-repeat transposable elements: discovery, distribution, and activity (Q38156243)

29 August 2017

title

Miniature inverted-repeat transposable elements: discovery, distribution, and activity (English)

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29 August 2017

Isam Fattash

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29 August 2017

Rebecca Rooke

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29 August 2017

Amy Wong

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29 August 2017

Caleb Hui

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29 August 2017

Tina Luu

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29 August 2017

Priyanka Bhardwaj

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29 August 2017

Guojun Yang

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29 August 2017

publication date

8 March 2013

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29 August 2017

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29 August 2017

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29 August 2017

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29 August 2017

page(s)

475-486

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Hairpin elements, the first family of foldback transposons (FTs) in Arabidopsis thaliana

29 August 2017

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The genome sequence of taurine cattle: a window to ruminant biology and evolution

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Non-mammalian c-integrases are encoded by giant transposable elements.

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Plant transposable elements: where genetics meets genomics

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Pearl, a novel family of putative transposable elements in bivalve mollusks

21 January 2018

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Precursor-product relationship between vitellogenin and the yolk proteins as derived from the complete sequence of a Xenopus vitellogenin gene

21 January 2018

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Genome sequence of the Brown Norway rat yields insights into mammalian evolution

21 January 2018

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A role for host-parasite interactions in the horizontal transfer of transposons across phyla

21 January 2018

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Master: a novel family of PIF/Harbinger-like transposable elements identified in carrot (Daucus carota L.).

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Population dynamics of miniature inverted-repeat transposable elements (MITEs) in Medicago truncatula.

21 January 2018

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Genome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction Studies

21 January 2018

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Genomic rearrangements by LINE-1 insertion-mediated deletion in the human and chimpanzee lineages

21 January 2018

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Burst expansion, distribution and diversification of MITEs in the silkworm genome

21 January 2018

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Spring: a novel family of miniature inverted-repeat transposable elements is associated with genes in apple

21 January 2018

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MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences

21 January 2018

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The genome of the Western clawed frog Xenopus tropicalis

21 January 2018

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Lineage-specific tandem repeats riding on a transposable element of MITE in Xenopus evolution: a new mechanism for creating simple sequence repeats.

21 January 2018

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The Genome Sequence of the Malaria Mosquito Anopheles gambiae

21 January 2018

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Vege and Mar: two novel hAT MITE families from Drosophila willistoni.

21 January 2018

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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

21 January 2018

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The genome of the cucumber, Cucumis sativus L

21 January 2018

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Genome sequence of the pea aphid Acyrthosiphon pisum

21 January 2018

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Genome sequencing and analysis of the model grass Brachypodium distachyon

21 January 2018

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Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The genome of a lepidopteran model insect, the silkworm Bombyx mori

21 January 2018

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The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Bioinformatics and genomic analysis of transposable elements in eukaryotic genomes

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

An active DNA transposon family in rice

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Pack-MULE transposable elements mediate gene evolution in plants

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs).

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

A gene family derived from transposable elements during early angiosperm evolution has reproductive fitness benefits in Arabidopsis thaliana

21 January 2018

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Repbase Update, a database of eukaryotic repetitive elements

21 January 2018

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RAG1 core and V(D)J recombination signal sequences were derived from Transib transposons

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Self-synthesizing DNA transposons in eukaryotes

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

PERSPECTIVE: TRANSPOSABLE ELEMENTS, PARASITIC DNA, AND GENOME EVOLUTION

21 January 2018

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The plant MITE mPing is mobilized in anther culture

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Mutations of the silkworm molybdenum cofactor sulfurase gene, og, cause translucent larval skin

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Initial sequencing and analysis of the human genome

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Identifying repeats and transposable elements in sequenced genomes: how to find your way through the dense forest of programs.

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Epigenetic reprogramming during vegetative phase change in maize

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The sequence and de novo assembly of the giant panda genome

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genome sequence, comparative analysis and haplotype structure of the domestic dog

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Horizontal transmission, vertical inactivation, and stochastic loss of mariner-like transposable elements

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Characterization of Stowaway MITEs in pea (Pisum sativum L.) and identification of their potential master elements

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Mobilization and evolutionary history of miniature inverted-repeat transposable elements (MITEs) in Beta vulgaris L.

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The Chlamydomonas genome reveals the evolution of key animal and plant functions

21 January 2018

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Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences

21 January 2018

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The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus).

21 January 2018

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The ancient mariner sails again: transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Miniature inverted-repeat transposable elements of Stowaway are active in potato

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

High potential of a transposon mPing as a marker system in japonica x japonica cross in rice

21 January 2018

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Dramatic amplification of a rice transposable element during recent domestication

21 January 2018

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Mobilization of a transposon in the rice genome

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genome sequence of Aedes aegypti, a major arbovirus vector

21 January 2018

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Suffix-tree analyser (STAN): looking for nucleotidic and peptidic patterns in chromosomes

21 January 2018

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The genome of the leaf-cutting ant Acromyrmex echinatior suggests key adaptations to advanced social life and fungus farming.

21 January 2018

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Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism

21 January 2018

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Identification and characterisation of five novel miniature inverted-repeat transposable elements (MITEs) in amphioxus (Branchiostoma floridae).

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Detection of a mariner-like element and a miniature inverted-repeat transposable element (MITE) associated with the heterochromatin from ants of the genus Messor and their possible involvement for satellite DNA evolution.

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

High-oleate peanut mutants result from a MITE insertion into the FAD2 gene

21 January 2018

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The Sorghum bicolor genome and the diversification of grasses

21 January 2018

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Dual coding of siRNAs and miRNAs by plant transposable elements

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The evolution of two partner LINE/SINE families and a full-length chromodomain-containing Ty3/Gypsy LTR element in the first reptilian genome of Anolis carolinensis.

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The amphioxus genome and the evolution of the chordate karyotype

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

P elements and MITE relatives in the whole genome sequence of Anopheles gambiae

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Complete Genome Sequence of the Anaerobic, Protein-Degrading Hyperthermophilic Crenarchaeon Desulfurococcus kamchatkensis

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Chompy: an infestation of MITE-like repetitive elements in the crocodilian genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Retrotransposon-induced heterochromatin spreading in the mouse revealed by insertional polymorphisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Tuareg, a novel miniature-inverted repeat family of pearl millet (Pennisetum glaucum) related to the PIF superfamily of maize.

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The genome of the model beetle and pest Tribolium castaneum

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

TE Displayer for post-genomic analysis of transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

A candidate autonomous version of the wheat MITE Hikkoshi is present in the rice genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genome-wide analysis of the Emigrant family of MITEs of Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genome structure of the legume, Lotus japonicus

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genomic structure of the NtPDR1 gene, harboring the two miniature inverted-repeat transposable elements, NtToya1 and NtStowaway101.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genome sequence of the palaeopolyploid soybean

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The B73 Maize Genome: Complexity, Diversity, and Dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Using the Acropora digitifera genome to understand coral responses to environmental change

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The genome of woodland strawberry (Fragaria vesca)

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Sequence analysis of transposable elements in the sea squirt, Ciona intestinalis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Epigenetic reprogramming and small RNA silencing of transposable elements in pollen

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Draft genome of the red harvester ant Pogonomyrmex barbatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Identification of a novel gene (Hsdr4) involved in water-stress tolerance in wild barley.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Characterization of repetitive DNA elements in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Repetitive-DNA elements are similarly distributed on Caenorhabditis elegans autosomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

A novel group of families of short interspersed repetitive elements (SINEs) in Xenopus: evidence of a specific target site for DNA-mediated transposition of inverted-repeat SINEs

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Transposon Display identifies individual transposable elements in high copy number lines

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

The genome of the domesticated apple (Malus × domestica Borkh.)

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genome sequence, comparative analysis, and population genetics of the domestic horse

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Characterization of a group of MITEs with unusual features from two coral genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Inverted repeat structure of the human genome: the X-chromosome contains a preponderance of large, highly homologous inverted repeats that contain testes genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genome analysis of the platypus reveals unique signatures of evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

21 January 2018

The genome of a songbird

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Initial sequencing and comparative analysis of the mouse genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

A unified classification system for eukaryotic transposable elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Identification of NbME MITE families: potential molecular markers in the microsporidia Nosema bombycis

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Triton, a novel family of miniature inverted-repeat transposable elements (MITEs) in Trichosanthes kirilowii Maximowicz and its effect on gene regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements

21 January 2018

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https://api.crossref.org/works/10.1139%2FGEN-2012-0174

MAK, a computational tool kit for automated MITE analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Kiddo, a new transposable element family closely associated with rice genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

A two-edged role for the transposable element Kiddo in the rice ubiquitin2 promoter

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

A rice Tc1/mariner-like element transposes in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Transposition of the rice miniature inverted repeat transposable element mPing in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Tuned for transposition: molecular determinants underlying the hyperactivity of a Stowaway MITE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

ATon, abundant novel nonautonomous mobile genetic elements in yellow fever mosquito (Aedes aegypti)

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

P instability factor: an active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Transposition of hAT elements links transposable elements and V(D)J recombination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Miniature Inverted-Repeat Transposable Element Identification and Genetic Marker Development in

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

Unexpected consequences of a sudden and massive transposon amplification on rice gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1139%2FGEN-2012-0174

21 January 2018

Identifiers

DOI

10.1139/GEN-2012-0174

1 reference

29 August 2017

1 reference