Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome (Q48073971)

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English	Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

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http://europepmc.org/abstract/MED/18612649

title

Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome (English)

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

main subject

barley

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author

Robbie Waugh

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4

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Robbie Waugh

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

author name string

Maura Lyons

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1

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

Linda Cardle

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2

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

Nils Rostoks

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3

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PubMed publication ID

18612649

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8 February 2018

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http://europepmc.org/abstract/MED/18612649

Andrew J Flavell

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5

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

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http://europepmc.org/abstract/MED/18612649

publication date

9 July 2008

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PubMed publication ID

18612649

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8 February 2018

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http://europepmc.org/abstract/MED/18612649

published in

Molecular Genetics and Genomics

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

volume

280

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

issue

4

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

page(s)

275-285

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Europe PubMed Central

PubMed publication ID

18612649

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8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

cites work

On the origin and domestication history of Barley (Hordeum vulgare).

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Evidence that a family of miniature inverted-repeat transposable elements (MITEs) from the Arabidopsis thaliana genome has arisen from a pogo-like DNA transposon

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The genetic basis of adaptive population differentiation: a quantitative trait locus analysis of fitness traits in two wild barley populations from contrasting habitats.

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Barley necrotic locus nec1 encodes the cyclic nucleotide-gated ion channel 4 homologous to the Arabidopsis HLM1

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CACTA transposons in Triticeae. A diverse family of high-copy repetitive elements

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Sequence-specific amplification polymorphisms (SSAPs): a multi-locus approach for analyzing transposon insertions

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

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Somatic integration and long-term transgene expression in normal and haemophilic mice using a DNA transposon system

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DEC: a new miniature inverted-repeat transposable element from the genome of the beetle Tenebrio molitor

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AFLP: a new technique for DNA fingerprinting

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Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements

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12 December 2020

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Evaluation of Hbr (MITE) markers for assessment of genetic relationships among maize ( Zea mays L.) inbred lines

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

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Mobilization of a transposon in the rice genome

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12 December 2020

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Transposon diversity in Arabidopsis thaliana

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12 December 2020

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An improved method to identify BAC clones using pooled overgos

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12 December 2020

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Genetic variations of AA genome Oryza species measured by MITE-AFLP.

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12 December 2020

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Mobile inverted-repeat elements of the Tourist family are associated with the genes of many cereal grasses

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12 December 2020

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P instability factor: an active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases

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Glider and Vision: two new families of miniature inverted-repeat transposable elements in Xenopus laevis genome

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12 December 2020

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A high-copy-number CACTA family transposon in temperate grasses and cereals

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12 December 2020

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Ty1-copia retrotransposon-based SSAP marker development in cashew (Anacardium occidentale L.).

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12 December 2020

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Distinguishing adaptive from nonadaptive genetic differentiation: comparison of Q(ST) and F(ST) at two spatial scales.

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12 December 2020

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Tourist: a large family of small inverted repeat elements frequently associated with maize genes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

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Rice transposable elements: a survey of 73,000 sequence-tagged-connectors

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12 December 2020

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EMBOSS: the European Molecular Biology Open Software Suite

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A movable feast: diverse retrotransposons and their contribution to barley genome dynamics

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PubMed

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12 December 2020

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inferred from PubMed ID database lookup

Insertional polymorphism and antiquity of PDR1 retrotransposon insertions in pisum species.

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PubMed

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12 December 2020

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Survey of transposable elements from rice genomic sequences

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PubMed

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12 December 2020

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Genetic evidence that Tn10 transposes by a nonreplicative mechanism

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12 December 2020

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Stowaway: a new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants

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https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

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Primer3 on the WWW for general users and for biologist programmers

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

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inferred from PubMed ID database lookup

Insertion preference of maize and rice miniature inverted repeat transposable elements as revealed by the analysis of nested elements

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PubMed

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12 December 2020

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Identification and characterization of 14 transposon-like elements in the noncoding regions of members of the Xa21 family of disease resistance genes in rice

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12 December 2020

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Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MDM-1 and MDM-2: two mutator-derived MITE families in rice

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

retrieved

12 December 2020

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inferred from PubMed ID database lookup

Clustal W and Clustal X version 2.0

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic distribution of Bare-1-like retrotransposable elements in the barley genome revealed by sequence-specific amplification polymorphisms (S-SAP)

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

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The MITE family heartbreaker (Hbr): molecular markers in maize

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/18612649

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1007/S00438-008-0363-0

1 reference

stated in

Europe PubMed Central

PubMed publication ID

18612649

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

PubMed publication ID

18612649

1 reference

stated in

Europe PubMed Central

PubMed publication ID

18612649

retrieved

8 February 2018

reference URL

http://europepmc.org/abstract/MED/18612649

ResearchGate publication ID

5239442

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