Impact of rare and low-frequency sequence variants on reliability of genomic prediction in dairy cattle (Q59336374)

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English	Impact of rare and low-frequency sequence variants on reliability of genomic prediction in dairy cattle	No description defined

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scholarly article

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title

Impact of rare and low-frequency sequence variants on reliability of genomic prediction in dairy cattle (English)

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author

Goutam Sahana

object named as

Goutam Sahana

series ordinal

2

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Mogens Sandø Lund

series ordinal

5

object named as

Mogens Sandø Lund

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author name string

Qianqian Zhang

series ordinal

1

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Guosheng Su

series ordinal

3

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Bernt Guldbrandtsen

series ordinal

4

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Mario P L Calus

series ordinal

6

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language of work or name

English

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publication date

20 November 2018

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published in

Genetics Selection Evolution

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volume

50

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issue

1

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page(s)

62

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copyright license

Creative Commons Attribution 4.0 International

start time

20 November 2018

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stated in

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

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Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle

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Fine mapping QTL for female fertility on BTA04 and BTA13 in dairy cattle using HD SNP and sequence data

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The effects of demography and long-term selection on the accuracy of genomic prediction with sequence data

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Low-frequency and rare exome chip variants associate with fasting glucose and type 2 diabetes susceptibility

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Quantitative trait loci markers derived from whole genome sequence data increases the reliability of genomic prediction.

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Sequence- vs. chip-assisted genomic selection: accurate biological information is advised.

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SNP annotation-based whole genomic prediction and selection: an application to feed efficiency and its component traits in pigs.

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Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds

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Runs of homozygosity and distribution of functional variants in the cattle genome

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Genetic variance estimation with imputed variants finds negligible missing heritability for human height and body mass index

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Genomic prediction using imputed whole-genome sequence data in Holstein Friesian cattle

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The Nature of Genetic Variation for Complex Traits Revealed by GWAS and Regional Heritability Mapping Analyses

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Rare Variants in Transcript and Potential Regulatory Regions Explain a Small Percentage of the Missing Heritability of Complex Traits in Cattle.

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Accuracy of genomic prediction using imputed whole-genome sequence data in white layers.

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Exploiting biological priors and sequence variants enhances QTL discovery and genomic prediction of complex traits.

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Genome-wide association analysis of milk yield traits in Nordic Red Cattle using imputed whole genome sequence variants

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Genome-wide association study for longevity with whole-genome sequencing in 3 cattle breeds

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Using Sequence Variants in Linkage Disequilibrium with Causative Mutations to Improve Across-Breed Prediction in Dairy Cattle: A Simulation Study

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Efficient genomic prediction based on whole-genome sequence data using split-and-merge Bayesian variable selection.

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Comparison of gene-based rare variant association mapping methods for quantitative traits in a bovine population with complex familial relationships

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based on heuristic

inferred from PubMed ID database lookup

Sequence variants selected from a multi-breed GWAS can improve the reliability of genomic predictions in dairy cattle

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30458700

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic prediction using preselected DNA variants from a GWAS with whole-genome sequence data in Holstein-Friesian cattle

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30458700

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12 December 2020

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Contribution of rare and low-frequency whole-genome sequence variants to complex traits variation in dairy cattle

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30458700

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Human-Mediated Introgression of Haplotypes in a Modern Dairy Cattle Breed

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PubMed

reference URL

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Identifiers

DOI

10.1186/S12711-018-0432-8

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Dimensions Publication ID

1110062657

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PMC publication ID

6247626

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PubMed publication ID

30458700

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