Sequence variants selected from a multi-breed GWAS can improve the reliability of genomic predictions in dairy cattle (Q28596445)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27809758%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27809758%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

Mogens S Lund

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27809758%20AND%20SRC:MED&resulttype=core&format=json

Genetics Selection Evolution

4 June 2020

language of work or name

English

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publication date

4 November 2016

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published in

1 reference

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4 June 2020

volume

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4 June 2020

issue

1 reference

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4 June 2020

page(s)

1 reference

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A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individuals

4 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

PLINK: a tool set for whole-genome association and population-based linkage analyses

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Fast and accurate genotype imputation in genome-wide association studies through pre-phasing

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Comparing power and precision of within-breed and multibreed genome-wide association studies of production traits using whole-genome sequence data for 5 French and Danish dairy cattle breeds

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Genomic correlation: harnessing the benefit of combining two unrelated populations for genomic selection

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Genomic prediction using imputed whole-genome sequence data in Holstein Friesian cattle

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Sequence- vs. chip-assisted genomic selection: accurate biological information is advised.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Impact of QTL properties on the accuracy of multi-breed genomic prediction.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Accounting for genetic architecture improves sequence based genomic prediction for a Drosophila fitness trait

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Quantitative trait loci markers derived from whole genome sequence data increases the reliability of genomic prediction.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Improved precision of QTL mapping using a nonlinear Bayesian method in a multi-breed population leads to greater accuracy of across-breed genomic predictions

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Multibreed genome wide association can improve precision of mapping causative variants underlying milk production in dairy cattle.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

High-density marker imputation accuracy in sixteen French cattle breeds

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Prediction of complex human traits using the genomic best linear unbiased predictor

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Efficiency of genomic selection using Bayesian multi-marker models for traits selected to reflect a wide range of heritabilities and frequencies of detected quantitative traits loci in mice.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Using whole-genome sequence data to predict quantitative trait phenotypes in Drosophila melanogaster

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

A common reference population from four European Holstein populations increases reliability of genomic predictions.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Reliabilities of genomic prediction using combined reference data of the Nordic Red dairy cattle populations.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Genome-wide association analysis of thirty one production, health, reproduction and body conformation traits in contemporary U.S. Holstein cows

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Impacts of both reference population size and inclusion of a residual polygenic effect on the accuracy of genomic prediction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Mutations in the bovine ABCG2 and the ovine MSTN gene added to the few quantitative trait nucleotides identified in farm animals: a mini-review

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

The impact of genetic relationship information on genomic breeding values in German Holstein cattle

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Accuracy of genomic breeding values in multi-breed dairy cattle populations

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Mapping genes for complex traits in domestic animals and their use in breeding programmes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Linkage disequilibrium and persistence of phase in Holstein-Friesian, Jersey and Angus cattle

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Fine mapping of quantitative trait loci affecting female fertility in dairy cattle on BTA03 using a dense single-nucleotide polymorphism map.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Quantitative trait loci mapping in dairy cattle: review and meta-analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Detection of genes influencing economic traits in three French dairy cattle breeds

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5095991

Short communication: Genomic selection using a multi-breed, across-country reference population.

29 September 2017

1 reference

https://api.crossref.org/works/10.1186%2FS12711-016-0259-0

Efficiency of multi-breed genomic selection for dairy cattle breeds with different sizes of reference population.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12711-016-0259-0

Detection of quantitative trait loci affecting milk production, health, and reproductive traits in Holstein cattle

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12711-016-0259-0

Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12711-016-0259-0

Estimation of genomic breeding values for residual feed intake in a multibreed cattle population.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12711-016-0259-0

Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS12711-016-0259-0

A genome scan to detect quantitative trait loci for economically important traits in Holstein cattle using two methods and a dense single nucleotide polymorphism map

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27809758

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/S12711-016-0259-0

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27809758%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

4 June 2020

1031623635

0 references

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27809758%20AND%20SRC:MED&resulttype=core&format=json

4 June 2020

PubMed publication ID

27809758

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27809758%20AND%20SRC:MED&resulttype=core&format=json