The Transcriptional Regulator TFB-RF1 Activates Transcription of a Putative ABC Transporter in Pyrococcus furiosus. (Q55070232)

From Wikidata

Jump to navigation Jump to search

scientific article published on 30 April 2018

edit

Language	Label	Description	Also known as
English	The Transcriptional Regulator TFB-RF1 Activates Transcription of a Putative ABC Transporter in Pyrococcus furiosus.	scientific article published on 30 April 2018

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

title

The Transcriptional Regulator TFB-RF1 Activates Transcription of a Putative ABC Transporter in Pyrococcus furiosus. (English)

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

main subject

Pyrococcus furiosus

object named as

Pyrococcus furiosus

1 reference

based on heuristic

inferred from title

author name string

Robert Reichelt

series ordinal

1

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

Katharina M A Ruperti

series ordinal

2

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

Martina Kreuzer

series ordinal

3

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

Stefan Dexl

series ordinal

4

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

Michael Thomm

series ordinal

5

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

Winfried Hausner

series ordinal

6

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

publication date

30 April 2018

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

published in

Frontiers in Microbiology

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

volume

9

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

page(s)

838

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

copyright license

Creative Commons Attribution 4.0 International

start time

30 April 2018

1 reference

stated in

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A global analysis of transcription reveals two modes of Spt4/5 recruitment to archaeal RNA polymerase.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Transcription Regulation in Archaea

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Genome-wide binding analysis of the transcriptional regulator TrmBL1 in Pyrococcus furiosus

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

The Pfam protein families database: towards a more sustainable future

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

The Transporter Classification Database (TCDB): recent advances

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Archaeal TFEα/β is a hybrid of TFIIE and the RNA polymerase III subcomplex hRPC62/39.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Transcription regulation in the third domain

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

The TrmB family: a versatile group of transcriptional regulators in Archaea

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

The RNA polymerase factory and archaeal transcription

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Cis-regulatory logic in archaeal transcription

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Primer3--new capabilities and interfaces

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Activation of archaeal transcription mediated by recruitment of transcription factor B.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

A workflow for genome-wide mapping of archaeal transcription factors with ChIP-seq.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

The P-glycoprotein multidrug transporter.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

The initiation factor TFE and the elongation factor Spt4/5 compete for the RNAP clamp during transcription initiation and elongation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Recent advances in the understanding of archaeal transcription.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Archaeal RNA polymerase and transcription regulation.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Integrative genomics viewer

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Shuttle vector-based transformation system for Pyrococcus furiosus

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Identification and genomic analysis of transcription factors in archaeal genomes exemplifies their functional architecture and evolutionary origin

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Galaxy: a web-based genome analysis tool for experimentalists

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Interaction of transcription activator GvpE with TATA-box-binding proteins of Halobacterium salinarum.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Membrane porters of ATP-binding cassette transport systems are polyphyletic

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

The Sequence Alignment/Map format and SAMtools

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

MEME SUITE: tools for motif discovery and searching

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

ABC transporters: the power to change

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

SurR: a transcriptional activator and repressor controlling hydrogen and elemental sulphur metabolism in Pyrococcus furiosus

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

TrmB, a sugar sensing regulator of ABC transporter genes in Pyrococcus furiosus exhibits dual promoter specificity and is controlled by different inducers

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Archaeal transcriptional regulation--variation on a bacterial theme?

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Archaeal transcription and its regulators

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

WebLogo: A Sequence Logo Generator

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

A Pyrococcus homolog of the leucine-responsive regulatory protein, LrpA, inhibits transcription by abrogating RNA polymerase recruitment

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

DNA-binding proteins and evolution of transcription regulation in the archaea

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Expression and characterization of DrrA and DrrB proteins of Streptomyces peucetius in Escherichia coli: DrrA is an ATP binding protein

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

P-glycoprotein and multidrug resistance

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

Multidrug resistance mediated by a bacterial homolog of the human multidrug transporter MDR1.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

18 June 2018

An upstream activation element exerting differential transcriptional activation on an archaeal promoter

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

13 August 2018

Transcription factor E is a part of transcription elongation complexes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

13 August 2018

Promoter architecture and response to a positive regulator of archaeal transcription.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5937170

retrieved

13 August 2018

Basal and regulated transcription in archaea

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/29760686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A novel archaeal transcriptional regulator of heat shock response

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/29760686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcription factor B contacts promoter DNA near the transcription start site of the archaeal transcription initiation complex

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/29760686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a glycolytic regulon in the archaea Pyrococcus and Thermococcus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/29760686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The RPB7 orthologue E' is required for transcriptional activity of a reconstituted archaeal core enzyme at low temperatures and stimulates open complex formation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/29760686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of the TrmB-like protein, PF0124, a TGM-recognizing global transcriptional regulator of the hyperthermophilic archaeon Pyrococcus furiosus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/29760686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of multiple tfb genes in different Halobacterium salinarum strains and interaction of TFB with transcriptional activator GvpE

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/29760686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bypassing the Need for the Transcriptional Activator EarA through a Spontaneous Deletion in the BRE Portion of the fla Operon Promoter in Methanococcus maripaludis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/29760686

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.3389/FMICB.2018.00838

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

PMC publication ID

5937170

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

PubMed publication ID

29760686

1 reference

stated in

Europe PubMed Central

PMC publication ID

5937170

retrieved

16 June 2018

reference URL

http://europepmc.org/abstract/PMC/5937170

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q55070232&oldid=1895095042"