Genome-wide binding analysis of the transcriptional regulator TrmBL1 in Pyrococcus furiosus (Q35889279)

10 August 2017

Genome-wide binding analysis of the transcriptional regulator TrmBL1 in Pyrococcus furiosus (English)

1 reference

10 August 2017

Pyrococcus furiosus

1 reference

Robert Reichelt

0 references

Antonia Gindner

1 reference

10 August 2017

Michael Thomm

series ordinal

1 reference

10 August 2017

Winfried Hausner

series ordinal

1 reference

10 August 2017

language of work or name

English

0 references

publication date

8 January 2016

1 reference

10 August 2017

1 reference

10 August 2017

1 reference

10 August 2017

1 reference

A transcription factor links growth rate and metabolism in the hypersaline adapted archaeon Halobacterium salinarum

10 August 2017

1 reference

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The genome-wide binding profile of the Sulfolobus solfataricus transcription factor Ss-LrpB shows binding events beyond direct transcription regulation

27 July 2018

1 reference

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27 July 2018

1 reference

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Data, information, knowledge and principle: back to metabolism in KEGG

27 July 2018

1 reference

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Protein-DNA binding dynamics predict transcriptional response to nutrients in archaea

27 July 2018

1 reference

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The three-dimensional structure of TrmB, a transcriptional regulator of dual function in the hyperthermophilic archaeonPyrococcus furiosusin complex with sucrose

27 July 2018

1 reference

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Expanded target and cofactor repertoire for the transcriptional activator LysM from Sulfolobus

27 July 2018

1 reference

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Structural and functional analyses of the interaction of archaeal RNA polymerase with DNA

27 July 2018

1 reference

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1 reference

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Activation of archaeal transcription mediated by recruitment of transcription factor B.

27 July 2018

1 reference

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A workflow for genome-wide mapping of archaeal transcription factors with ChIP-seq.

27 July 2018

1 reference

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27 July 2018

1 reference

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FIMO: scanning for occurrences of a given motif

27 July 2018

1 reference

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27 July 2018

1 reference

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Histone and TK0471/TrmBL2 form a novel heterogeneous genome architecture in the hyperthermophilic archaeon Thermococcus kodakarensis

27 July 2018

1 reference

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Direct and indirect effects of H-NS and Fis on global gene expression control in Escherichia coli

27 July 2018

1 reference

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Evaluation of algorithm performance in ChIP-seq peak detection

27 July 2018

1 reference

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Identification and genomic analysis of transcription factors in archaeal genomes exemplifies their functional architecture and evolutionary origin

27 July 2018

1 reference

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Prevalence of transcription promoters within archaeal operons and coding sequences.

27 July 2018

1 reference

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A single transcription factor regulates evolutionarily diverse but functionally linked metabolic pathways in response to nutrient availability

27 July 2018

1 reference

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MEME SUITE: tools for motif discovery and searching

27 July 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

27 July 2018

1 reference

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The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments

27 July 2018

1 reference

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27 July 2018

1 reference

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SurR: a transcriptional activator and repressor controlling hydrogen and elemental sulphur metabolism in Pyrococcus furiosus

27 July 2018

1 reference

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Model-based analysis of ChIP-Seq (MACS)

27 July 2018

1 reference

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Extensive genome rearrangements and multiple horizontal gene transfers in a population of pyrococcus isolates from Vulcano Island, Italy

27 July 2018

1 reference

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The role of TrmB and TrmB-like transcriptional regulators for sugar transport and metabolism in the hyperthermophilic archaeon Pyrococcus furiosus

27 July 2018

1 reference

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Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo

27 July 2018

1 reference

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Functional-genomics-based identification and characterization of open reading frames encoding alpha-glucoside-processing enzymes in the hyperthermophilic archaeon Pyrococcus furiosus.

27 July 2018

1 reference

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Chromatin immunoprecipitation: optimization, quantitative analysis and data normalization

27 July 2018

1 reference

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Genome-wide mapping of in vivo protein-DNA interactions

27 July 2018

1 reference

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Differential signal transduction via TrmB, a sugar sensing transcriptional repressor of Pyrococcus furiosus

27 July 2018

1 reference

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Crystal structure of the archaeal heat shock regulator from Pyrococcus furiosus: a molecular chimera representing eukaryal and bacterial features

27 July 2018

1 reference

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General transcription factor specified global gene regulation in archaea

27 July 2018

1 reference

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Transcriptional and biochemical analysis of starch metabolism in the hyperthermophilic archaeon Pyrococcus furiosus.

27 July 2018

1 reference

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TrmB, a sugar sensing regulator of ABC transporter genes in Pyrococcus furiosus exhibits dual promoter specificity and is controlled by different inducers

27 July 2018

1 reference

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Archaeal transcriptional regulation--variation on a bacterial theme?

27 July 2018

1 reference

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Biochemical evidence for the presence of two alpha-glucoside ABC-transport systems in the hyperthermophilic archaeon Pyrococcus furiosus

27 July 2018

1 reference

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Whole-genome DNA microarray analysis of a hyperthermophile and an archaeon: Pyrococcus furiosus grown on carbohydrates or peptides.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4706686

TrmB, a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter from the hyperthermophilic archaeon Thermococcus litoralis

27 July 2018

1 reference

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Evidence of recent lateral gene transfer among hyperthermophilic archaea

27 July 2018

1 reference

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Inducible metabolism of phenolic acids in Pediococcus pentosaceus is encoded by an autoregulated operon which involves a new class of negative transcriptional regulator

27 July 2018

1 reference

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Mechanism of autoregulation by an archaeal transcriptional repressor

27 July 2018

1 reference

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27 July 2018

1 reference

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A cell-free transcription system for the hyperthermophilic archaeon Pyrococcus furiosus

27 July 2018

1 reference

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Molecular and phylogenetic characterization of pyruvate and 2-ketoisovalerate ferredoxin oxidoreductases from Pyrococcus furiosus and pyruvate ferredoxin oxidoreductase from Thermotoga maritima

27 July 2018

1 reference

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27 July 2018

1 reference

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Genetic examination and mass balance analysis of pyruvate/amino acid oxidation pathways in the hyperthermophilic archaeon Thermococcus kodakarensis

27 July 2018

1 reference

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The TrmB family: a versatile group of transcriptional regulators in Archaea

24 September 2018

1 reference

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Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

24 September 2018

1 reference

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Inferring direct DNA binding from ChIP-seq

24 September 2018

1 reference

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Recent advances in the understanding of archaeal transcription.

24 September 2018

1 reference

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Shuttle vector-based transformation system for Pyrococcus furiosus

24 September 2018

1 reference

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Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data

24 September 2018

1 reference

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24 September 2018

1 reference

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A global transcriptional regulator in Thermococcus kodakaraensis controls the expression levels of both glycolytic and gluconeogenic enzyme-encoding genes

24 September 2018

1 reference

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Enhancements and modifications of primer design program Primer3.

24 September 2018

1 reference

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An expanding family of archaeal transcriptional activators

24 September 2018

1 reference

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Evidence for genetic drift in the diversification of a geographically isolated population of the hyperthermophilic archaeon Pyrococcus

24 September 2018

1 reference

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A new mathematical model for relative quantification in real-time RT-PCR

24 September 2018

1 reference

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Transcriptional regulation of an archaeal operon in vivo and in vitro

24 September 2018

1 reference

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Pyrococcus furiosus sp. nov. represents a novel genus of marine heterotrophic archaebacteria growing optimally at 100�C

24 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2FS12864-015-2360-0

Characterization of the TrmB-like protein, PF0124, a TGM-recognizing global transcriptional regulator of the hyperthermophilic archaeon Pyrococcus furiosus

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26747700

12 December 2020

inferred from PubMed ID database lookup

Identification of a glycolytic regulon in the archaea Pyrococcus and Thermococcus

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26747700

12 December 2020

inferred from PubMed ID database lookup

A novel archaeal transcriptional regulator of heat shock response

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26747700

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/S12864-015-2360-0

1 reference

release_se3p6ee63fga7cjw5ak7usgqbe

10 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/se3p6ee63fga7cjw5ak7usgqbe

24 November 2022

mapped directly with Wikidata item

1 reference

10 August 2017

PubMed publication ID

26747700

1 reference