Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice (Q42594425)

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scientific article published on 12 August 2008

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English	Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice	scientific article published on 12 August 2008

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scholarly article

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

title

Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice (English)

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

main subject

comparative genomics

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author name string

Zefeng Yang

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1

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PubMed publication ID

18696028

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3 November 2017

Shiliang Gu

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2

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

Xuefeng Wang

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3

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

Wenjuan Li

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4

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

Zaixiang Tang

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5

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

Chenwu Xu

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6

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

language of work or name

English

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publication date

12 August 2008

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18696028

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3 November 2017

published in

Journal of Molecular Evolution

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

volume

67

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Europe PubMed Central

PubMed publication ID

18696028

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3 November 2017

issue

3

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Europe PubMed Central

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18696028

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3 November 2017

page(s)

266-277

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PubMed publication ID

18696028

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3 November 2017

cites work

Gene conversion and the evolution of three leucine-rich repeat gene families in Arabidopsis thaliana

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Codon-substitution models for heterogeneous selection pressure at amino acid sites

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Co-evolution of proteins with their interaction partners

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Evolution of NIN-like proteins in Arabidopsis, rice, and Lotus japonicus

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Adaptive evolution in the Arabidopsis MADS-box gene family inferred from its complete resolved phylogeny

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Lineage-specific gene expansions in bacterial and archaeal genomes

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Divergence of the Dof gene families in poplar, Arabidopsis, and rice suggests multiple modes of gene evolution after duplication

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Arabidopsis TSO1 regulates directional processes in cells during floral organogenesis

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Likelihood-ratio tests for positive selection of human and mouse duplicate genes reveal nonconservative and anomalous properties of widely used methods

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Molecular phylogeny and evolution of the plant-specific seven-transmembrane MLO family

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A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

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Point mutations with positive selection were a major force during the evolution of a receptor-kinase resistance gene family of rice

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Evolutionary expansion, gene structure, and expression of the rice wall-associated kinase gene family

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Arabidopsis ribonucleotide reductases are critical for cell cycle progression, DNA damage repair, and plant development

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Molecular phylogeny, evolution, and functional divergence of the LSD1-like gene family: inference from the rice genome

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Bayes empirical bayes inference of amino acid sites under positive selection

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The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds zinc in vitro and TSO1 is required for both male and female fertility in Arabidopsis thaliana

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The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

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12 December 2020

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Regulation of meristem organization and cell division by TSO1, an Arabidopsis gene with cysteine-rich repeats

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12 December 2020

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The map-based sequence of the rice genome

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12 December 2020

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Evolutionary dynamics of the DNA-binding domains in putative R2R3-MYB genes identified from rice subspecies indica and japonica genomes.

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Patterns of gene duplication in the plant SKP1 gene family in angiosperms: evidence for multiple mechanisms of rapid gene birth

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TSO1 is a novel protein that modulates cytokinesis and cell expansion in Arabidopsis

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The Genomes of Oryza sativa: a history of duplications

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PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments

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Genome-wide analysis, evolutionary expansion, and expression of early auxin-responsive SAUR gene family in rice (Oryza sativa)

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Expansion of the receptor-like kinase/Pelle gene family and receptor-like proteins in Arabidopsis

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Evolution of Arabidopsis microRNA families through duplication events

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based on heuristic

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Comparative analysis of the receptor-like kinase family in Arabidopsis and rice

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PubMed

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12 December 2020

based on heuristic

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The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana

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12 December 2020

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Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

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Accuracy and power of the likelihood ratio test in detecting adaptive molecular evolution

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CPP1, a DNA-binding protein involved in the expression of a soybean leghemoglobin c3 gene

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Comparative study of SBP-box gene family in Arabidopsis and rice

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MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

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The role of lineage-specific gene family expansion in the evolution of eukaryotes

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Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes

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Identifiers

DOI

10.1007/S00239-008-9143-Z

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Europe PubMed Central

PubMed publication ID

18696028

retrieved

3 November 2017

PubMed publication ID

18696028

1 reference

stated in

Europe PubMed Central

PubMed publication ID

18696028

retrieved

3 November 2017

 

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