Comparative genomics in acid mine drainage biofilm communities reveals metabolic and structural differentiation of co-occurring archaea (Q30543365)

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5 March 2020

title

Comparative genomics in acid mine drainage biofilm communities reveals metabolic and structural differentiation of co-occurring archaea (English)

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5 March 2020

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5 March 2020

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5 March 2020

Vincent J Denef

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5 March 2020

Alexis P Yelton

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5 March 2020

Luis R Comolli

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5 March 2020

Nicholas B Justice

series ordinal

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5 March 2020

Brian C Thomas

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5 March 2020

language of work or name

English

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publication date

17 July 2013

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5 March 2020

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5 March 2020

volume

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5 March 2020

page(s)

485

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Heterotrophic archaea contribute to carbon cycling in low-pH, suboxic biofilm communities

5 March 2020

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The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase

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Biogeography of the Sulfolobus islandicus pan-genome

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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A Thermophilic, Acidophilic Mycoplasma Isolated from a Coal Refuse Pile

20 June 2018

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Sequence analysis and expression of the Salmonella typhimurium asr operon encoding production of hydrogen sulfide from sulfite

20 June 2018

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The respiratory chain ofThiobacillus ferrooxidans: The reduction of cytochromes by Fe2+and the preliminary characterization of rusticyanin a novel ‘blue’ copper protein

20 June 2018

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Prediction of effective genome size in metagenomic samples

20 June 2018

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Soluble expression of recombinant proteins in the cytoplasm of Escherichia coli

21 January 2018

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The rus operon genes are differentially regulated when Acidithiobacillus ferrooxidans LR is kept in contact with metal sulfides

21 January 2018

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The linked conservation of structure and function in a family of high diversity: the monomeric cupredoxins

21 January 2018

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Sulfocyanin and subunit II, two copper proteins with novel features, provide new insight into the archaeal SoxM oxidase supercomplex.

21 January 2018

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Towards determining details of anaerobic growth coupled to ferric iron reduction by the acidophilic archaeon 'Ferroplasma acidarmanus' Fer1.

21 January 2018

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Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydroge

21 January 2018

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Production of methanethiol and volatile sulfur compounds by the archaeon "Ferroplasma acidarmanus".

21 January 2018

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Unusual ADP-forming acetyl-coenzyme A synthetases from the mesophilic halophilic euryarchaeon Haloarcula marismortui and from the hyperthermophilic crenarchaeon Pyrobaculum aerophilum

21 January 2018

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Regulation of acetate and acetyl-CoA converting enzymes during growth on acetate and/or glucose in the halophilic archaeon Haloarcula marismortui

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-485

Formate-driven growth coupled with H2 production

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-485

Molecular insight into extreme copper resistance in the extremophilic archaeon 'Ferroplasma acidarmanus' Fer1.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-485

The fla gene cluster is involved in the biogenesis of flagella in Halobacterium salinarum

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-485

A simple and fast secondary structure prediction method using hidden neural networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-485

Ferrous iron oxidation by sulfur-oxidizing Acidithiobacillus ferrooxidans and analysis of the process at the levels of transcription and protein synthesis.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750248

Organic solutes in hyperthermophilic archaea.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750248

Insight into molecular stability and physiological properties of the diheme cytochrome CYC41 from the acidophilic bacterium Acidithiobacillus ferrooxidans

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750248

Arsenic resistance in the archaeon "Ferroplasma acidarmanus": new insights into the structure and evolution of the ars genes.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750248

The archaeal respiratory supercomplex SoxM from S. acidocaldarius combines features of quinole and cytochrome c oxidases

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750248

Characterization of a new dihemic c(4)-type cytochrome isolated from Thiobacillus ferrooxidans

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3750248

New structural proteins of Halobacterium salinarum gas vesicle revealed by comparative proteomics analysis

26 November 2018

1 reference

12 December 2020

Redox components of cytochrome bc-type enzymes in acidophilic prokaryotes. I. Characterization of the cytochrome bc1-type complex of the acidophilic ferrous ion-oxidizing bacterium Thiobacillus ferrooxidans

1 reference

12 December 2020

Insertional inactivation of the flaH gene in the archaeon Methanococcus voltae results in non-flagellated cells

1 reference

12 December 2020

Glycan structure of a heptose-containing S-layer glycoprotein of Bacillus thermoaerophilus

1 reference

12 December 2020

Proteomic and bioinformatic analysis of iron- and sulfur-oxidizing Acidithiobacillus ferrooxidans using immobilized pH gradients and mass spectrometry

1 reference

12 December 2020

Mutants in flaI and flaJ of the archaeon Methanococcus voltae are deficient in flagellum assembly

1 reference

12 December 2020

Structural heterogeneity in the core oligosaccharide of the S-layer glycoprotein from Aneurinibacillus thermoaerophilus DSM 10155

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-14-485

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23865623%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

5 March 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-14-485

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23865623%20AND%20SRC:MED&resulttype=core&format=json

5 March 2020

PubMed publication ID

23865623

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23865623%20AND%20SRC:MED&resulttype=core&format=json