Detection of low-abundance bacterial strains in metagenomic datasets by eigengenome partitioning (Q35773591)

10 August 2017

title

Detection of low-abundance bacterial strains in metagenomic datasets by eigengenome partitioning (English)

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10 August 2017

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Dirk Gevers

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10 August 2017

Eric J Alm

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10 August 2017

Brian Cleary

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10 August 2017

Ilana Lauren Brito

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10 August 2017

Katherine Huang

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10 August 2017

Terrance Shea

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10 August 2017

Sarah Young

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10 August 2017

publication date

14 September 2015

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10 August 2017

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10 August 2017

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10 August 2017

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10 August 2017

page(s)

1053-1060

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MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

10 August 2017

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Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization

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Comparative metagenomics of microbial communities

27 July 2018

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Binning metagenomic contigs by coverage and composition

27 July 2018

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Global biogeography of highly diverse protistan communities in soil

25 September 2018

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Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences

25 September 2018

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25 September 2018

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Redefining the role of intestinal microbes in the pathogenesis of necrotizing enterocolitis

25 September 2018

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A genomic distance based on MUM indicates discontinuity between most bacterial species and genera.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4720164

Mapping short DNA sequencing reads and calling variants using mapping quality scores

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4720164

Computational improvements reveal great bacterial diversity and high metal toxicity in soil

25 September 2018

1 reference

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Indexing by latent semantic analysis

25 September 2018

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Crossref

https://api.crossref.org/works/10.1038%2FNBT.3329

MetAMOS: a metagenomic assembly and analysis pipeline for AMOS.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNBT.3329

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NBT.3329

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10 August 2017

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10 August 2017

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