Meta-IDBA: a de Novo assembler for metagenomic data (Q33936126)

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English	Meta-IDBA: a de Novo assembler for metagenomic data	scientific article

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instance of

scholarly article

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Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

title

Meta-IDBA: a de Novo assembler for metagenomic data (English)

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stated in

Europe PubMed Central

PubMed publication ID

21685107

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30 July 2017

main subject

metagenomics

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based on heuristic

inferred from title

author name string

Yu Peng

series ordinal

1

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stated in

Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

Henry C M Leung

series ordinal

2

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

S M Yiu

series ordinal

3

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

Francis Y L Chin

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4

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

language of work or name

English

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publication date

1 July 2011

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stated in

Europe PubMed Central

PubMed publication ID

21685107

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30 July 2017

published in

Bioinformatics

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stated in

Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

volume

27

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stated in

Europe PubMed Central

PubMed publication ID

21685107

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30 July 2017

issue

13

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Europe PubMed Central

PubMed publication ID

21685107

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30 July 2017

page(s)

i94-101

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Europe PubMed Central

PubMed publication ID

21685107

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30 July 2017

copyright license

Creative Commons Attribution-NonCommercial 2.5 Generic

start time

2 October 2016

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stated in

April 2023 Public Data File from Crossref

copyright status

copyrighted

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cites work

A novel abundance-based algorithm for binning metagenomic sequences using l-tuples.

1 reference

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PubMed Central

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5 July 2018

A human gut microbial gene catalogue established by metagenomic sequencing

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PubMed Central

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5 July 2018

A primer on metagenomics

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PubMed Central

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5 July 2018

Pebble and rock band: heuristic resolution of repeats and scaffolding in the velvet short-read de novo assembler

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PubMed Central

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5 July 2018

De novo assembly of human genomes with massively parallel short read sequencing

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PubMed Central

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5 July 2018

Assisted assembly: how to improve a de novo genome assembly by using related species

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PubMed Central

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5 July 2018

Genome assembly reborn: recent computational challenges

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PubMed Central

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5 July 2018

ABySS: a parallel assembler for short read sequence data

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PubMed Central

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5 July 2018

NCBI Reference Sequences: current status, policy and new initiatives

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117360

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5 July 2018

Species richness in soil bacterial communities: a proposed approach to overcome sample size bias

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117360

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5 July 2018

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

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PubMed Central

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5 July 2018

Phylogenetic classification of short environmental DNA fragments

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PubMed Central

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5 July 2018

Short read fragment assembly of bacterial genomes

1 reference

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PubMed Central

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5 July 2018

Use of simulated data sets to evaluate the fidelity of metagenomic processing methods

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117360

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5 July 2018

MEGAN analysis of metagenomic data

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117360

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5 July 2018

Predicting microbial species richness

1 reference

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117360

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5 July 2018

How independent are the appearances of n-mers in different genomes?

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PubMed Central

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5 July 2018

BLAT—The BLAST-Like Alignment Tool

1 reference

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117360

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5 July 2018

An Eulerian path approach to DNA fragment assembly

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117360

retrieved

5 July 2018

De novo fragment assembly with short mate-paired reads: Does the read length matter?

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3117360

retrieved

29 October 2018

Identifiers

DOI

10.1093/BIOINFORMATICS/BTR216

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

DBLP publication ID

journals/bioinformatics/PengLYC11

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

Internet Archive ID

pubmed-PMC3117360

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PMC publication ID

3117360

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

PubMed publication ID

21685107

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21685107

retrieved

30 July 2017

ResearchGate publication ID

51230581

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