Fair evaluation of global network aligners (Q35700567)

9 August 2017

title

Fair evaluation of global network aligners (English)

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9 August 2017

Tijana Milenković

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9 August 2017

Joseph Crawford

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9 August 2017

Yihan Sun

series ordinal

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9 August 2017

publication date

9 June 2015

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Algorithms for Molecular Biology

9 August 2017

published in

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9 August 2017

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9 August 2017

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Improving the Robustness of Local Network Alignment: Design and Extensive Assessment of a Markov Clustering-Based Approach

9 August 2017

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12 July 2018

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Dynamic networks reveal key players in aging

12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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12 July 2018

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Graphlet-based edge clustering reveals pathogen-interacting proteins

12 July 2018

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12 July 2018

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NetAligner--a network alignment server to compare complexes, pathways and whole interactomes.

12 July 2018

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A novel framework for the comparative analysis of biological networks

12 July 2018

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12 July 2018

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Optimal network alignment with graphlet degree vectors

12 July 2018

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Topological network alignment uncovers biological function and phylogeny

12 July 2018

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Automatic parameter learning for multiple local network alignment

12 July 2018

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Systems-level cancer gene identification from protein interaction network topology applied to melanogenesis-related functional genomics data

12 July 2018

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Global alignment of protein-protein interaction networks by graph matching methods

12 July 2018

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IsoRankN: spectral methods for global alignment of multiple protein networks

12 July 2018

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Domain-oriented edge-based alignment of protein interaction networks

12 July 2018

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Uncovering biological network function via graphlet degree signatures.

12 July 2018

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A new graph-based method for pairwise global network alignment

12 July 2018

1 reference

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GraphCrunch: a tool for large network analyses

12 July 2018

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The BioGRID Interaction Database: 2008 update

12 July 2018

1 reference

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Toward a comprehensive atlas of the physical interactome of Saccharomyces cerevisiae

12 July 2018

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Graemlin: general and robust alignment of multiple large interaction networks

12 July 2018

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Cross-species analysis of biological networks by Bayesian alignment

12 July 2018

1 reference

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Modeling cellular machinery through biological network comparison

12 July 2018

1 reference

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Conserved patterns of protein interaction in multiple species

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4460690

Local graph alignment and motif search in biological networks

12 July 2018

1 reference

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PathBLAST: a tool for alignment of protein interaction networks

12 July 2018

1 reference

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Gene ontology: tool for the unification of biology

12 July 2018

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Basic local alignment search tool

12 July 2018

1 reference

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Global Network Alignment in the Context of Aging

12 July 2018

1 reference

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MAGNA: Maximizing Accuracy in Global Network Alignment

25 September 2018

1 reference

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Integrative network alignment reveals large regions of global network similarity in yeast and human

25 September 2018

1 reference

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Global alignment of multiple protein interaction networks.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4460690

Biological network comparison using graphlet degree distribution

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4460690

NetAlign: a web-based tool for comparison of protein interaction networks

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4460690

Pairwise alignment of protein interaction networks.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4460690

10.1186/S13015-015-0050-8

25 September 2018

Identifiers

DOI

1 reference

journals/almob/CrawfordSM15

9 August 2017

1 reference

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

9 August 2017

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