Cross-species analysis of biological networks by Bayesian alignment (Q34984226)

5 August 2017

title

Cross-species analysis of biological networks by Bayesian alignment (English)

1 reference

5 August 2017

Johannes Berg

1 reference

5 August 2017

Michael Lässig

series ordinal

1 reference

5 August 2017

language of work or name

English

0 references

publication date

11 July 2006

1 reference

Proceedings of the National Academy of Sciences of the United States of America

5 August 2017

published in

1 reference

5 August 2017

volume

103

1 reference

5 August 2017

1 reference

5 August 2017

page(s)

10967-10972

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

5 August 2017

1 reference

Functional alignment of regulatory networks: a study of temperate phages

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Identification of protein complexes by comparative analysis of yeast and bacterial protein interaction data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Conservation and evolvability in regulatory networks: the evolution of ribosomal regulation in yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Sorting points into neighborhoods (SPIN): data analysis and visualization by ordering distance matrices

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Conserved patterns of protein interaction in multiple species

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Local graph alignment and motif search in biological networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

PathBLAST: a tool for alignment of protein interaction networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Essential role for poly (ADP-ribosyl)ation in mouse preimplantation development

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

A neutral model of transcriptome evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

A gene atlas of the mouse and human protein-encoding transcriptomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Conserved pathways within bacteria and yeast as revealed by global protein network alignment

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

A gene-coexpression network for global discovery of conserved genetic modules

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Network motifs: simple building blocks of complex networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Network motifs in the transcriptional regulation network of Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Gene ontology: tool for the unification of biology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Identification of common molecular subsequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

A general method applicable to the search for similarities in the amino acid sequence of two proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

A high-throughput assay for Tn5 Tnp-induced DNA cleavage

8 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602294103

Alignment of metabolic pathways.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602294103

Systematic discovery of analogous enzymes in thiamin biosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602294103

CONREAL web server: identification and visualization of conserved transcription factor binding sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602294103

Deriving phylogenetic trees from the similarity analysis of metabolic pathways

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1544158

Non-orthologous gene displacement

26 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0602294103

Non-orthologous gene displacement

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16835301

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0602294103

1 reference

release_dolmpeoofjhkrehgxwczx2rogi

5 August 2017

0 references

1 reference

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/dolmpeoofjhkrehgxwczx2rogi

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

1544158

1 reference

5 August 2017

1 reference