Pairwise alignment of protein interaction networks. (Q51944579)

18 April 2018

title

Pairwise alignment of protein interaction networks. (English)

1 reference

18 April 2018

Wojciech Szpankowski

1 reference

18 April 2018

author name string

Mehmet Koyutürk

1 reference

18 April 2018

Yohan Kim

1 reference

18 April 2018

Umut Topkara

1 reference

18 April 2018

Shankar Subramaniam

1 reference

18 April 2018

Ananth Grama

1 reference

18 April 2018

publication date

1 March 2006

1 reference

18 April 2018

Journal of Computational Biology

published in

1 reference

18 April 2018

volume

1 reference

18 April 2018

issue

1 reference

18 April 2018

page(s)

182-199

1 reference

18 April 2018

The yeast protein interaction network evolves rapidly and contains few redundant duplicate genes

cites work

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Evolution and topology in the yeast protein interaction network

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Greedily building protein networks with confidence

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Evolutionary conservation of motif constituents in the yeast protein interaction network

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Duplication models for biological networks.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

A comprehensive two-hybrid analysis to explore the yeast protein interactome

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Spectra of random graphs with given expected degrees.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Structure of 20S proteasome from yeast at 2.4 A resolution

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Evolving protein interaction networks through gene duplication

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Evolutionary rate in the protein interaction network

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Preferential Attachment in the Protein Network Evolution

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Local modeling of global interactome networks

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Mining coherent dense subgraphs across massive biological networks for functional discovery

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

PathBLAST: a tool for alignment of protein interaction networks

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Predicting protein complex membership using probabilistic network reliability

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Subunit interaction maps for the regulatory particle of the 26S proteasome and the COP9 signalosome.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Conserved patterns of protein interaction in multiple species

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Evolution of the yeast protein interaction network

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Identification of common molecular subsequences

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Functional evolution of the yeast protein interaction network

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Pathway alignment: application to the comparative analysis of glycolytic enzymes

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

The COG database: a tool for genome-scale analysis of protein functions and evolution

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Functional organization of the yeast proteome by systematic analysis of protein complexes

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

How the global structure of protein interaction networks evolves

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

A statistical framework for combining and interpreting proteomic datasets

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

From molecular to modular cell biology

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Emergence of Scaling in Random Networks

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

What do we learn from high-throughput protein interaction data?

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

BIND--The Biomolecular Interaction Network Database

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Network motifs in integrated cellular networks of transcription-regulation and protein-protein interaction

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Functional modules by relating protein interaction networks and gene expression.

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Genetic analysis of calmodulin and its targets in Saccharomyces cerevisiae

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

An Efficient Heuristic Procedure for Partitioning Graphs

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Conserved pathways within bacteria and yeast as revealed by global protein network alignment

1 reference

2 April 2022

https://opencitations.net/index/coci/api/v1/references/10.1089/CMB.2006.13.182

Identifiers

DOI

10.1089/CMB.2006.13.182

1 reference

18 April 2018

journals/jcb/KoyuturkKTSSG06

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

18 April 2018