Genome-wide survey of cold stress regulated alternative splicing in Arabidopsis thaliana with tiling microarray (Q34776758)

4 August 2017

title

Genome-wide survey of cold stress regulated alternative splicing in Arabidopsis thaliana with tiling microarray (English)

1 reference

alternative mRNA splicing, via spliceosome

4 August 2017

0 references

1 reference

Noam Leviatan

1 reference

4 August 2017

Noam Alkan

series ordinal

1 reference

4 August 2017

Dena Leshkowitz

series ordinal

1 reference

4 August 2017

Robert Fluhr

series ordinal

1 reference

4 August 2017

language of work or name

English

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publication date

11 June 2013

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4 August 2017

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4 August 2017

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4 August 2017

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4 August 2017

page(s)

e66511

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Creative Commons Attribution 4.0 International

4 August 2017

start time

11 June 2013

1 reference

April 2022 Public Data File from Crossref

copyrighted

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cites work

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Low temperature promotes intron retention in two e-cor genes of durum wheat

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679080

Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

7 July 2018

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Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

7 July 2018

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Empirical analysis of transcriptional activity in the Arabidopsis genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679080

RPS4-mediated disease resistance requires the combined presence of RPS4 transcripts with full-length and truncated open reading frames

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679080

Regulatory network of gene expression in the drought and cold stress responses.

7 July 2018

1 reference

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7 July 2018

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7 July 2018

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ICE1: a regulator of cold-induced transcriptome and freezing tolerance in Arabidopsis

7 July 2018

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Looking at mRNA decay pathways through the window of molecular evolution

7 July 2018

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Alternative splicing modulation by a LAMMER kinase impinges on developmental and transcriptome expression

7 July 2018

1 reference

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Summaries of Affymetrix GeneChip probe level data

7 July 2018

1 reference

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679080

Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679080

Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679080

Microarray data normalization and transformation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3679080

Monitoring the expression profiles of 7000 Arabidopsis genes under drought, cold and high-salinity stresses using a full-length cDNA microarray

7 July 2018

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Large-scale transcriptional activity in chromosomes 21 and 22

7 July 2018

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Empirical characterization of the expression ratio noise structure in high-density oligonucleotide arrays

7 July 2018

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7 July 2018

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A genomic view of alternative splicing

7 July 2018

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SR proteins: a conserved family of pre-mRNA splicing factors

7 July 2018

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The Arabidopsis cold-responsive transcriptome and its regulation by ICE1.

7 July 2018

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STABILIZED1, a stress-upregulated nuclear protein, is required for pre-mRNA splicing, mRNA turnover, and stress tolerance in Arabidopsis.

21 January 2018

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Alternative splicing of pre-mRNAs of Arabidopsis serine/arginine-rich proteins: regulation by hormones and stresses.

21 January 2018

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Functional significance of the alternative transcript processing of the Arabidopsis floral promoter FCA.

21 January 2018

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Two alternatively spliced isoforms of the Arabidopsis SR45 protein have distinct roles during normal plant development.

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Whole-genome microarray in Arabidopsis facilitates global analysis of retained introns

21 January 2018

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Extensive coupling of alternative splicing of pre-mRNAs of serine/arginine (SR) genes with nonsense-mediated decay

21 January 2018

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Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes.

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Intron retention is a major phenomenon in alternative splicing in Arabidopsis.

21 January 2018

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21 January 2018

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HORMONOMETER: a tool for discerning transcript signatures of hormone action in the Arabidopsis transcriptome

21 January 2018

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21 January 2018

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Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis

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12 December 2020

Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway

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12 December 2020

10.1371/JOURNAL.PONE.0066511

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DOI

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4 August 2017

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1 reference

4 August 2017

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