Mapping the genome landscape using tiling array technology (Q24647253)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

review article

1 reference

title

Mapping the genome landscape using tiling array technology (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

Junshi Yazaki

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

Brian D Gregory

series ordinal

1 reference

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3 January 2020

language of work or name

English

0 references

publication date

20 August 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json

Current Opinion in Plant Biology

3 January 2020

published in

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3 January 2020

volume

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3 January 2020

issue

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3 January 2020

page(s)

534-542

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json

Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis

3 January 2020

cites work

1 reference

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A systematic search for new mammalian noncoding RNAs indicates little conserved intergenic transcription

7 April 2017

1 reference

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Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana

7 April 2017

1 reference

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Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays

7 April 2017

1 reference

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Identifying transcriptional targets

7 April 2017

1 reference

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Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing

7 April 2017

1 reference

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Yeast microarrays for genome wide parallel genetic and gene expression analysis

7 April 2017

1 reference

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Fewer Genes, More Noncoding RNA

7 April 2017

1 reference

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Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene

7 April 2017

1 reference

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High-resolution profiling of histone methylations in the human genome

7 April 2017

1 reference

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A bivalent chromatin structure marks key developmental genes in embryonic stem cells

7 April 2017

1 reference

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The transcriptional landscape of the mammalian genome

7 April 2017

1 reference

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Quantitative monitoring of gene expression patterns with a complementary DNA microarray

7 April 2017

1 reference

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S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex

7 April 2017

1 reference

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Mapping of transcription factor binding regions in mammalian cells by ChIP: comparison of array- and sequencing-based technologies

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Whole-genome analysis of histone H3 lysine 27 trimethylation in Arabidopsis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Noncoding RNA transcription beyond annotated genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

RNAi, DRD1, and histone methylation actively target developmentally important non-CG DNA methylation in arabidopsis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Control of developmental regulators by Polycomb in human embryonic stem cells

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Applications of DNA tiling arrays for whole-genome analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Empirical analysis of transcriptional activity in the Arabidopsis genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Large-scale transcriptional activity in chromosomes 21 and 22

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Epigenetic variation in Arabidopsis disease resistance

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Hypermethylated SUPERMAN Epigenetic Alleles in Arabidopsis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Genome-wide mapping of in vivo protein-DNA interactions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Polycomb complexes repress developmental regulators in murine embryonic stem cells

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Antisense transcription in the mammalian transcriptome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

RNA maps reveal new RNA classes and a possible function for pervasive transcription

7 April 2017

1 reference

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Genome-wide analysis of mammalian promoter architecture and evolution

7 April 2017

1 reference

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Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana

7 April 2017

1 reference

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Epigenetic decisions in mammalian germ cells.

27 September 2017

1 reference

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DNA demethylation in the Arabidopsis genome.

27 September 2017

1 reference

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Small RNA-mediated chromatin silencing directed to the 3' region of the Arabidopsis gene encoding the developmental regulator, FLC.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

DNA methylation dynamics in plant genomes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Noncoding RNAs and gene silencing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Functionality of intergenic transcription: an evolutionary comparison

27 September 2017

1 reference

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Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Development of Arabidopsis whole-genome microarrays and their application to the discovery of binding sites for the TGA2 transcription factor in salicylic acid-treated plants

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

RNA interference is not involved in natural antisense mediated regulation of gene expression in mammals

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Poetry of b1 paramutation: cis- and trans-chromatin communication

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Epigenetic control of plant development by Polycomb-group proteins.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Epigenomic mapping in Arabidopsis using tiling microarrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Gardening the genome: DNA methylation in Arabidopsis thaliana

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Plant genomics: the third wave.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Interaction of Polycomb-group proteins controlling flowering in Arabidopsis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

The role of RNA interference in heterochromatic silencing

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Mouse-centric comparative transcriptomics of protein coding and non-coding RNAs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Chromatin conversations: mechanisms and implications of paramutation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

ChIP-chip: considerations for the design, analysis, and application of genome-wide chromatin immunoprecipitation experiments

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

High-resolution analysis of DNA copy number using oligonucleotide microarrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Epigenetic gene regulation by noncoding RNAs

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Genomewide analysis of mRNA processing in yeast using splicing-specific microarrays

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Polycomb repression of flowering during early plant development

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1).

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Experimental annotation of the human genome using microarray technology

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Arabidopsis PAI gene arrangements, cytosine methylation and expression

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Parallel human genome analysis: microarray-based expression monitoring of 1000 genes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Methylation of coding region alone inhibits gene expression in plant protoplasts

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Methylation induced premeiotically in Ascobolus: coextension with DNA repeat lengths and effect on transcript elongation

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Effect of regional DNA methylation on gene expression

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Genetic evidence for promoter competition in Saccharomyces cerevisiae

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

The imprinted Air ncRNA is an atypical RNAPII transcript that evades splicing and escapes nuclear export

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Epigenetic control of an endogenous gene family is revealed by a novel blue fluorescent mutant of Arabidopsis

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Novel Transcribed Regions in the Human Genome

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

The DNA glycosylase/lyase ROS1 functions in pruning DNA methylation patterns in Arabidopsis.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Tsix defective in splicing is competent to establish Xist silencing

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

Genome-wide transcription analyses in rice using tiling microarrays

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

DEMETER, a DNA glycosylase domain protein, is required for endosperm gene imprinting and seed viability in arabidopsis.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2665186

A tiling resolution DNA microarray with complete coverage of the human genome

28 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17703988

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Silencing of retrotransposons in arabidopsis and reactivation by the ddm1 mutation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17703988

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.PBI.2007.07.006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json

3 January 2020

PubMed publication ID

17703988

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17703988%20AND%20SRC:MED&resulttype=core&format=json