TopHat: discovering splice junctions with RNA-Seq (Q24655505)

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Language	Label	Description	Also known as
English	TopHat: discovering splice junctions with RNA-Seq	scientific article

Statements

instance of

scholarly article

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title

TopHat: discovering splice junctions with RNA-Seq (English)

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main subject

computational mathematics

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RNA sequencing

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TopHat

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RNA-Seq

1 reference

based on heuristic

inferred from title

author

Steven Salzberg

series ordinal

3

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Lior Pachter

series ordinal

2

object named as

Lior Pachter

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Cole Trapnell

series ordinal

1

object named as

Cole Trapnell

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language of work or name

English

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publication date

1 May 2009

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published in

Bioinformatics

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stated in

PubMed

volume

25

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issue

9

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page(s)

1105-11

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describes a project that uses

RNA-Seq

1 reference

based on heuristic

inferred from title

cites work

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

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stated in

PubMed Central

reference URL

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7 April 2017

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7 April 2017

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PubMed Central

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Isolation of a brefeldin A-inhibited guanine nucleotide-exchange protein for ADP ribosylation factor (ARF) 1 and ARF3 that contains a Sec7-like domain

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7 April 2017

Mapping and quantifying mammalian transcriptomes by RNA-Seq

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7 April 2017

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7 April 2017

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28 September 2017

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28 September 2017

AltTrans: transcript pattern variants annotated for both alternative splicing and alternative polyadenylation.

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28 November 2018

Replacing suffix trees with enhanced suffix arrays

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Crossref

reference URL

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retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

DOI

10.1093/BIOINFORMATICS/BTP120

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

154823

DBLP publication ID

journals/bioinformatics/TrapnellPS09

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

OpenCitations bibliographic resource ID

154823

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

154823

PMC publication ID

2672628

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

154823

PubMed publication ID

19289445

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

154823

ResearchGate publication ID

24203835

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