Streamlining and core genome conservation among highly divergent members of the SAR11 clade (Q28275390)

object named as

Stephen J Giovannoni

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author name string

Jana Grote

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J Cameron Thrash

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Zachary C Landry

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Michael S Rappé

Phylogenomic evidence for a common ancestor of mitochondria and the SAR11 clade

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language of work or name

English

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publication date

2012

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e00252-12-e00252-12

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cites work

1 reference

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The SAR11 group of alpha-proteobacteria is not related to the origin of mitochondria

20 March 2017

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Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration

20 March 2017

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Biogeography of the Sulfolobus islandicus pan-genome

20 March 2017

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On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales

20 March 2017

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Rickettsia Phylogenomics: Unwinding the Intricacies of Obligate Intracellular Life

20 March 2017

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Unique glycine-activated riboswitch linked to glycine-serine auxotrophy in SAR11

20 March 2017

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The small genome of an abundant coastal ocean methylotroph

20 March 2017

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Patterns and implications of gene gain and loss in the evolution of Prochlorococcus

20 March 2017

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A robust species tree for the alphaproteobacteria

20 March 2017

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The Sorcerer II Global Ocean Sampling expedition: northwest Atlantic through eastern tropical Pacific

20 March 2017

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RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

20 March 2017

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Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"

20 March 2017

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The hierarchical system of the 'Alphaproteobacteria': description of Hyphomonadaceae fam. nov., Xanthobacteraceae fam. nov. and Erythrobacteraceae fam. nov

20 March 2017

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20 March 2017

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Comparative analyses of fundamental differences in membrane transport capabilities in prokaryotes and eukaryotes

6 April 2017

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Genome Streamlining in a Cosmopolitan Oceanic Bacterium

20 March 2017

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Accelerated evolution associated with genome reduction in a free-living prokaryote

20 March 2017

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Comparative genomics of gene-family size in closely related bacteria

20 March 2017

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Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

20 March 2017

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Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome

20 March 2017

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Diversification and spectral tuning in marine proteorhodopsins

20 March 2017

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Evolution of gene order conservation in prokaryotes

20 March 2017

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Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS

20 March 2017

1 reference

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The Minimal Gene Complement of Mycoplasma genitalium

20 March 2017

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The Chlamydia psittaci genome: a comparative analysis of intracellular pathogens

20 March 2017

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The origins of genome complexity

20 March 2017

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7 April 2017

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7 April 2017

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Genome sequence of strain HIMB624, a cultured representative from the OM43 clade of marine Betaproteobacteria

7 April 2017

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Comparative genomics of Mycoplasma: analysis of conserved essential genes and diversity of the pan-genome

29 September 2017

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A semi-quantitative, synteny-based method to improve functional predictions for hypothetical and poorly annotated bacterial and archaeal genes

29 September 2017

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One carbon metabolism in SAR11 pelagic marine bacteria

29 September 2017

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Novel insights into the diversity of catabolic metabolism from ten haloarchaeal genomes

29 September 2017

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Evaluating ortholog prediction algorithms in a yeast model clade

29 September 2017

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Genome Reduction by Deletion of Paralogs in the Marine Cyanobacterium Prochlorococcus

29 September 2017

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Marine bacterial, archaeal and protistan association networks reveal ecological linkages.

29 September 2017

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Hal: an Automated Pipeline for Phylogenetic Analyses of Genomic Data

29 September 2017

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Novel Analysis of Oceanic Surface Water Metagenomes Suggests Importance of Polyphosphate Metabolism in Oligotrophic Environments

29 September 2017

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Ecosystem-specific selection pressures revealed through comparative population genomics

29 September 2017

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Rickettsial evolution in the light of comparative genomics

29 September 2017

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Transcriptional and translational regulatory responses to iron limitation in the globally distributed marine bacterium Candidatus pelagibacter ubique

29 September 2017

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Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relatives

29 September 2017

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The presence of the glycolysis operon in SAR11 genomes is positively correlated with ocean productivity

29 September 2017

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Comparative systems biology across an evolutionary gradient within the Shewanella genus.

29 September 2017

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The genomic basis of trophic strategy in marine bacteria

29 September 2017

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What genomic sequence information has revealed about Vibrio ecology in the ocean--a review

29 September 2017

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Analysis of complete genome sequence of Neorickettsia risticii: causative agent of Potomac horse fever

29 September 2017

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Seasonality and vertical structure of microbial communities in an ocean gyre

29 September 2017

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Latitudinal distribution of prokaryotic picoplankton populations in the Atlantic Ocean.

29 September 2017

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29 September 2017

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Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea.

29 September 2017

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Multiple genome sequences reveal adaptations of a phototrophic bacterium to sediment microenvironments

29 September 2017

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SAR11 marine bacteria require exogenous reduced sulphur for growth

29 September 2017

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Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter.

29 September 2017

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Genome evolution in cyanobacteria: the stable core and the variable shell

29 September 2017

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Adaptation and spectral tuning in divergent marine proteorhodopsins from the eastern Mediterranean and the Sargasso Seas

29 September 2017

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Natural variation in SAR11 marine bacterioplankton genomes inferred from metagenomic data

29 September 2017

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Prokaryotic taxonomy and phylogeny in the genomic era: advancements and challenges ahead

29 September 2017

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Ecological genomics of marine Roseobacters

29 September 2017

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The oceanic phosphorus cycle

29 September 2017

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Annually reoccurring bacterial communities are predictable from ocean conditions

29 September 2017

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Phosphate acquisition genes in Prochlorococcus ecotypes: evidence for genome-wide adaptation

29 September 2017

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Genomic islands and the ecology and evolution of Prochlorococcus.

29 September 2017

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Comparative genomic analysis of three strains of Ehrlichia ruminantium reveals an active process of genome size plasticity

29 September 2017

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29 September 2017

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Proteorhodopsin in the ubiquitous marine bacterium SAR11.

29 September 2017

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Towards a genome-based taxonomy for prokaryotes

29 September 2017

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SAR11 clade dominates ocean surface bacterioplankton communities.

29 September 2017

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Cultivation of the ubiquitous SAR11 marine bacterioplankton clade.

29 September 2017

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High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates

29 September 2017

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Deletional bias and the evolution of bacterial genomes

29 September 2017

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Proteorhodopsin phototrophy in the ocean.

29 September 2017

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Establishment of an animal-bacterial association: recruiting symbiotic vibrios from the environment

29 September 2017

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Opening the iron box: transcriptional metalloregulation by the Fur protein.

29 September 2017

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Complete Genome Sequence of Strain IMCC9063, Belonging to SAR11 Subgroup 3, Isolated from the Arctic Ocean

29 September 2017

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Explaining microbial population genomics through phage predation

2 June 2018

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High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11).

2 June 2018

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The bacterial irr protein is required for coordination of heme biosynthesis with iron availability

2 June 2018

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Genome content of uncultivated marine Roseobacters in the surface ocean

2 June 2018

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Genome characteristics of a generalist marine bacterial lineage

27 November 2018

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A comparison of homologous recombination rates in bacteria and archaea

27 November 2018

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Comparative genomics of two ecotypes of the marine planktonic copiotroph Alteromonas macleodii suggests alternative lifestyles associated with different kinds of particulate organic matter

27 November 2018

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Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site

27 November 2018

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Inference and Analysis of the Relative Stability of Bacterial Chromosomes

27 November 2018

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Gene duplication and biased functional retention of paralogs in bacterial genomes

27 November 2018

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Orthology, paralogy and proposed classification for paralog subtypes

27 November 2018

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