Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration (Q21135458)

From Wikidata

Jump to navigation Jump to search

scientific article published on May 9, 2011

• Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration

edit

Language	Label	Description	Also known as
English	Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration	scientific article published on May 9, 2011	Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration

Statements

instance of

scholarly article

0 references

title

Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration (English)

0 references

Energy Starved Candidatus Pelagibacter Ubique Substitutes Light-Mediated ATP Production for Endogenous Carbon Respiration (English)

1 reference

stated in

Crossref

DOI

10.1371/JOURNAL.PONE.0019725

reference URL

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0019725

retrieved

2 December 2024

main subject

Candidatus

1 reference

based on heuristic

inferred from title

Pelagibacter ubique

object named as

Candidatus Pelagibacter ubique

1 reference

based on heuristic

inferred from title

author

Stephen J. Giovannoni

series ordinal

5

author given names

Stephen J

author last names

Giovannoni

object named as

Stephen J Giovannoni

1 reference

stated in

PubMed

PubMed publication ID

21573025

retrieved

16 August 2022

author name string

Laura Steindler

series ordinal

1

author given names

Laura

author last names

Steindler

1 reference

stated in

PubMed

PubMed publication ID

21573025

retrieved

16 August 2022

Francis Chan

series ordinal

4

author given names

Francis

author last names

Chan

1 reference

stated in

PubMed

PubMed publication ID

21573025

retrieved

16 August 2022

Michael S. Schwalbach

series ordinal

2

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21573025

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21573025

retrieved

2 December 2024

Daniel P. Smith

series ordinal

3

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21573025

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21573025

retrieved

2 December 2024

language of work or name

English

0 references

publication date

2011

0 references

9 May 2011

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21573025

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21573025

retrieved

2 December 2024

full work available at URL

https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0019725&type=printable

file format

Portable Document Format

online access status

open access

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21573025

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21573025

retrieved

2 December 2024

https://europepmc.org/articles/PMC3090418

file format

HTML

online access status

open access

content deliverer

Europe PubMed Central

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21573025

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21573025

retrieved

2 December 2024

https://europepmc.org/articles/PMC3090418?pdf=render

file format

Portable Document Format

online access status

open access

content deliverer

Europe PubMed Central

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21573025

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21573025

retrieved

2 December 2024

http://dx.plos.org/10.1371/journal.pone.0019725

1 reference

stated in

Crossref

DOI

10.1371/JOURNAL.PONE.0019725

reference URL

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0019725

retrieved

2 December 2024

published in

PLOS One

0 references

volume

6

0 references

issue

5

0 references

page(s)

e19725

0 references

copyright license

Creative Commons Attribution 4.0 International

start time

9 May 2011

1 reference

stated in

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Proteorhodopsin phototrophy promotes survival of marine bacteria during starvation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

Proteorhodopsin photosystem gene expression enables photophosphorylation in a heterologous host

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

New insights into metabolic properties of marine bacteria encoding proteorhodopsins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

Diversification and spectral tuning in marine proteorhodopsins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

Genome Streamlining in a Cosmopolitan Oceanic Bacterium

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

The Uncultured Microbial Majority

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

Environmental genome shotgun sequencing of the Sargasso Sea

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

DNA uptake in bacteria

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

19 March 2017

Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

7 April 2017

Recognition of DNA by Fur: a reinterpretation of the Fur box consensus sequence

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

7 April 2017

TM4 microarray software suite

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

7 April 2017

Bacterial rhodopsin: evidence for a new type of phototrophy in the sea

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

7 April 2017

Environmental proteomics of microbial plankton in a highly productive coastal upwelling system

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Enhancement of survival and electricity production in an engineered bacterium by light-driven proton pumping

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Constitutive expression of the proteorhodopsin gene by a flavobacterium strain representative of the proteorhodopsin-producing microbial community in the North Sea.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

The presence of the glycolysis operon in SAR11 genomes is positively correlated with ocean productivity

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria).

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Proteorhodopsins: an array of physiological roles?

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Proteomic analysis of stationary phase in the marine bacterium "Candidatus Pelagibacter ubique".

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

SAR11 marine bacteria require exogenous reduced sulphur for growth

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Proteorhodopsin photosystem gene clusters exhibit co-evolutionary trends and shared ancestry among diverse marine microbial phyla

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Light-powering Escherichia coli with proteorhodopsin

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Functional specialization within the Fur family of metalloregulators

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Light stimulates growth of proteorhodopsin-containing marine Flavobacteria.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Proteorhodopsin lateral gene transfer between marine planktonic Bacteria and Archaea

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Proteorhodopsin in the ubiquitous marine bacterium SAR11.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Characterization of RS29, a blue-green proteorhodopsin variant from the Red Sea.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Proteorhodopsin genes are distributed among divergent marine bacterial taxa

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Novel Proteorhodopsin variants from the Mediterranean and Red Seas.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

SAR11 clade dominates ocean surface bacterioplankton communities.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Transcriptional and proteomic analysis of a ferric uptake regulator (fur) mutant of Shewanella oneidensis: possible involvement of fur in energy metabolism, transcriptional regulation, and oxidative stress

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Proteorhodopsin phototrophy in the ocean.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

Operator sequences of the aerobactin operon of plasmid ColV-K30 binding the ferric uptake regulation (fur) repressor

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

12 September 2017

High intraspecific recombination rate in a native population of Candidatus pelagibacter ubique (SAR11).

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

30 May 2018

The SAR92 clade: an abundant coastal clade of culturable marine bacteria possessing proteorhodopsin

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3090418

retrieved

30 May 2018

Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea.

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019725

retrieved

21 January 2018

A comparison of homologous recombination rates in bacteria and archaea

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019725

retrieved

21 January 2018

Binding of the Fur (ferric uptake regulator) repressor of Escherichia coli to arrays of the GATAAT sequence

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019725

retrieved

21 January 2018

Culturing the marine cyanobacterium Prochlorococcus

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0019725

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Size Limits of Very Small Microorganisms: Proceedings of a Workshop

series ordinal

29

1 reference

stated in

Crossref

DOI

10.1371/JOURNAL.PONE.0019725

reference URL

https://api.crossref.org/works/10.1371/JOURNAL.PONE.0019725

retrieved

2 December 2024

Identifiers

DOI

10.1371/JOURNAL.PONE.0019725

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2988710

ADS bibcode

2011PLoSO...619725S

0 references

OpenCitations bibliographic resource ID

2988710

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2988710

PMC publication ID

3090418

0 references

PubMed publication ID

21573025

0 references

ResearchGate publication ID

51127511

0 references

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q21135458&oldid=2282531282"