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144 Open 212 Closed
144 Open 212 Closed
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Issues list

Exclude labels of lowest taxon_rank
#367 opened Oct 15, 2024 by fionnualabulman
1
Coloring of branches based on different groups (taxa detection by 12S, 16S gene regions)
#366 opened Sep 26, 2024 by Meng-OY
Running into error when plotting alpha diversity indexes
#365 opened Aug 22, 2024 by ChathuZ
2
Using ANCOM-BC2 for DA analysis
#364 opened Jul 29, 2024 by scilexenko
Error in layout$fun(graph = list(1598, TRUE, c(0, 0, 0, 0, 0, 0, 0, 0, : At rinterface_extra.c:82 : The value 10.642051692927977 is not representable as an integer. Invalid value
#362 opened Feb 6, 2024 by dhadsell
7
Phyloseq heat tree doesn't see taxon_id or supertaxon_id when trying filter_taxa?
#359 opened Nov 4, 2023 by hank00000
9
how to get access to the Taxmap dataframe ?
#358 opened Oct 27, 2023 by mariabernard
1
Relative abundance in heat tree
#357 opened Oct 25, 2023 by SimonMorvan
4
Getting incorrectly formated results with zero_low_counts
#356 opened Oct 24, 2023 by dhadsell
4
calc_diff_abund_deseq2, linear variables and "design"?
#351 opened Aug 9, 2023 by msolbach
3
Creation of different heat trees by treatments definded in sample data file
#350 opened Jul 19, 2023 by kazpa-kay
ggtext compatibility
#347 opened Mar 27, 2023 by Gian77
2
italicize node labels?
#345 opened Jan 25, 2023 by taylorreiter
2
Filter_taxa issue (No "taxon_id" column in the data set "3", so there are no taxon IDs)
#342 opened Aug 2, 2022 by SimonMorvan
1
Color nodes according to correlation between relative abundance and external variables
#340 opened Jun 29, 2022 by jpcasasruiz
5
Error in repel_boxes(data_points = as.matrix(text_data[movable, c("x", : std::bad_alloc
#338 opened May 18, 2022 by zachary-foster
Figure readability for publication?
#336 opened Apr 1, 2022 by hbbshulman
1
metacoder with MetagenomeSeq
#335 opened Mar 21, 2022 by acpaulo
5
Error with parse_tax_data and installation issues
#334 opened Mar 1, 2022 by zachary-foster
12
Failure when installing metacoder in RStudio in both windows and Ubuntu 20.04
#333 opened Feb 25, 2022 by emankhalaf
2
Confusion about filter_taxa and filter_obs
#332 opened Feb 10, 2022 by levlitichev
3
Update example data format
#331 opened Feb 2, 2022 by zachary-foster
Export p-values with heircachy amd taxanomic names?
#330 opened Jan 20, 2022 by catherineel
2
Alpha-diversity assessed by richness (Chao1, ACE)
#329 opened Dec 29, 2021 by biosciences
2
How to filter non-significant odd named taxa, and only keep the significant odd named taxa?
#324 opened Oct 25, 2021 by catherineel
8
ProTip! Exclude everything labeled bug with -label:bug.