Coronaviruses: genome structure, replication, and pathogenesis (Q83500389)

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scientific article published on 22 January 2020

• Emerging coronaviruses: genome structure, replication, and pathogenesis

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English	Coronaviruses: genome structure, replication, and pathogenesis	scientific article published on 22 January 2020	Emerging coronaviruses: genome structure, replication, and pathogenesis

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instance of

scholarly article

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Europe PubMed Central

PMC publication ID

7167049

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

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2 May 2020

review article

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Europe PubMed Central

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PubMed

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22 October 2022

title

Emerging coronaviruses: Genome structure, replication, and pathogenesis (English)

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Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

main subject

Coronavirus

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respiratory tract

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virus classification

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SARS-CoV-2

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COVID-19 pandemic

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SARS-CoV-2 transmission

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author

Deyin Guo

series ordinal

3

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Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

author name string

Yu Chen

series ordinal

1

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Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

Qianyun Liu

series ordinal

2

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Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

language of work or name

English

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publication date

7 February 2020

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Europe PubMed Central

PMC publication ID

7167049

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

1 April 2020

1 reference

stated in

PubMed Central

retrieved

22 October 2022

published in

Journal of Medical Virology

2 references

stated in

Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

stated in

PubMed Central

retrieved

22 October 2022

volume

92

1 reference

stated in

Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

issue

4

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stated in

Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

page(s)

418-423

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Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

cites work

Assembly of coronavirus spike protein into trimers and its role in epitope expression

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

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Virus-encoded proteinases and proteolytic processing in the Nidovirales.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

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Treatment of SARS with human interferons

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

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The severe acute respiratory syndrome-coronavirus replicative protein nsp9 is a single-stranded RNA-binding subunit unique in the RNA virus world.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of novel subgenomic RNAs and noncanonical transcription initiation signals of severe acute respiratory syndrome coronavirus

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential maturation and subcellular localization of severe acute respiratory syndrome coronavirus surface proteins S, M and E.

1 reference

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The nsp2 replicase proteins of murine hepatitis virus and severe acute respiratory syndrome coronavirus are dispensable for viral replication

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Insights into SARS-CoV transcription and replication from the structure of the nsp7-nsp8 hexadecamer

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modular organization of SARS coronavirus nucleocapsid protein

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Discovery of an RNA virus 3'->5' exoribonuclease that is critically involved in coronavirus RNA synthesis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ultrastructure and origin of membrane vesicles associated with the severe acute respiratory syndrome coronavirus replication complex

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA recognition and cleavage by the SARS coronavirus endoribonuclease

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Architecture of the SARS coronavirus prefusion spike

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The molecular biology of coronaviruses

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A contemporary view of coronavirus transcription.

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A severe acute respiratory syndrome coronavirus that lacks the E gene is attenuated in vitro and in vivo

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Review of bats and SARS

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteolytic processing of polyproteins 1a and 1ab between non-structural proteins 10 and 11/12 of Coronavirus infectious bronchitis virus is dispensable for viral replication in cultured cells.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Murine coronaviruses encoding nsp2 at different genomic loci have altered replication, protein expression, and localization

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional screen reveals SARS coronavirus nonstructural protein nsp14 as a novel cap N7 methyltransferase

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of in vivo-interacting domains of the murine coronavirus nucleocapsid protein

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coronaviruses post-SARS: update on replication and pathogenesis

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nuclear Magnetic Resonance Structure of the Nucleic Acid-Binding Domain of Severe Acute Respiratory Syndrome Coronavirus Nonstructural Protein 3

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Murine Hepatitis Virus Nonstructural Protein 4 Regulates Virus-Induced Membrane Modifications and Replication Complex Function

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The RNA polymerase activity of SARS-coronavirus nsp12 is primer dependent

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Infidelity of SARS-CoV Nsp14-exonuclease mutant virus replication is revealed by complete genome sequencing

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A structural analysis of M protein in coronavirus assembly and morphology

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal Structure and Functional Analysis of the SARS-Coronavirus RNA Cap 2′-O-Methyltransferase nsp10/nsp16 Complex

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biochemical and Structural Insights into the Mechanisms of SARS Coronavirus RNA Ribose 2′-O-Methylation by nsp16/nsp10 Protein Complex

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The SARS-coronavirus nsp7+nsp8 complex is a unique multimeric RNA polymerase capable of both de novo initiation and primer extension

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SARS coronavirus nsp1 protein induces template-dependent endonucleolytic cleavage of mRNAs: viral mRNAs are resistant to nsp1-induced RNA cleavage

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Discovery of seven novel Mammalian and avian coronaviruses in the genus deltacoronavirus supports bat coronaviruses as the gene source of alphacoronavirus and betacoronavirus and avian coronaviruses

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA 3'-end mismatch excision by the severe acute respiratory syndrome coronavirus nonstructural protein nsp10/nsp14 exoribonuclease complex

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biochemical characterization of a recombinant SARS coronavirus nsp12 RNA-dependent RNA polymerase capable of copying viral RNA templates

1 reference

stated in

PubMed

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https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Severe acute respiratory syndrome coronavirus nsp1 facilitates efficient propagation in cells through a specific translational shutoff of host mRNA.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transmission scenarios for Middle East Respiratory Syndrome Coronavirus (MERS-CoV) and how to tell them apart

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Severe acute respiratory syndrome coronavirus nonstructural proteins 3, 4, and 6 induce double-membrane vesicles

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coronaviruses lacking exoribonuclease activity are susceptible to lethal mutagenesis: evidence for proofreading and potential therapeutics

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chimeric exchange of coronavirus nsp5 proteases (3CLpro) identifies common and divergent regulatory determinants of protease activity

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Broad-spectrum antivirals for the emerging Middle East respiratory syndrome coronavirus

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and characterization of a bat SARS-like coronavirus that uses the ACE2 receptor

1 reference

stated in

PubMed

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https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A decade after SARS: strategies for controlling emerging coronaviruses

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Severe acute respiratory syndrome coronavirus envelope protein ion channel activity promotes virus fitness and pathogenesis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coronavirus NSP6 restricts autophagosome expansion

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The effectiveness of convalescent plasma and hyperimmune immunoglobulin for the treatment of severe acute respiratory infections of viral etiology: a systematic review and exploratory meta-analysis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coronavirus Nsp10, a critical co-factor for activation of multiple replicative enzymes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutations across murine hepatitis virus nsp4 alter virus fitness and membrane modifications

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Thiopurine analogs and mycophenolic acid synergistically inhibit the papain-like protease of Middle East respiratory syndrome coronavirus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coronaviruses: an overview of their replication and pathogenesis.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bat coronavirus in Brazil related to appalachian ridge and porcine epidemic diarrhea viruses

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coronavirus nsp10/nsp16 Methyltransferase Can Be Targeted by nsp10-Derived Peptide In Vitro and In Vivo To Reduce Replication and Pathogenesis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Nucleocapsid Protein of Coronaviruses Acts as a Viral Suppressor of RNA Silencing in Mammalian Cells

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural basis and functional analysis of the SARS coronavirus nsp14-nsp10 complex

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular mechanisms of coronavirus RNA capping and methylation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epidemiology, Genetic Recombination, and Pathogenesis of Coronaviruses

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SARS and MERS: recent insights into emerging coronaviruses

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biochemical Characterization of Middle East Respiratory Syndrome Coronavirus Helicase

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Porcine deltacoronavirus nsp5 inhibits interferon-β production through the cleavage of NEMO.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Porcine Deltacoronavirus nsp5 Antagonizes Type I Interferon Signaling by Cleaving STAT2.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coronavirus nonstructural protein 15 mediates evasion of dsRNA sensors and limits apoptosis in macrophages

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of Middle East respiratory syndrome coronavirus helicase.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nsp3 of coronaviruses: Structures and functions of a large multi-domain protein

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fatal swine acute diarrhoea syndrome caused by an HKU2-related coronavirus of bat origin.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dimerization of Coronavirus nsp9 with Diverse Modes Enhances Its Nucleic Acid Binding Affinity

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and Biochemical Characterization of Endoribonuclease Nsp15 Encoded by Middle East Respiratory Syndrome Coronavirus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Origin and evolution of pathogenic coronaviruses

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PEDV nsp16 negatively regulates innate immunity to promote viral proliferation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Delicate structural coordination of the Severe Acute Respiratory Syndrome coronavirus Nsp13 upon ATP hydrolysis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure of the SARS-CoV nsp12 polymerase bound to nsp7 and nsp8 co-factors

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Curious Case of the Nidovirus Exoribonuclease: Its Role in RNA Synthesis and Replication Fidelity

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/31967327

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1002/JMV.25681

1 reference

stated in

Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

COVIDWHO ID

covidwho-989

0 references

Dimensions Publication ID

1124223406

1 reference

stated in

Dimensions COVID-19 publications, datasets and clinical trials

retrieved

28 May 2020

PMC publication ID

7167049

1 reference

stated in

Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

PubMed publication ID

31967327

1 reference

stated in

Europe PubMed Central

PMC publication ID

7167049

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31967327%20AND%20SRC:MED&resulttype=core&format=json

retrieved

2 May 2020

Semantic Scholar corpus ID

210870377

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