PE-Assembler: de novo assembler using short paired-end reads (Q82843337)

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scientific article published on December 12, 2010

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English	PE-Assembler: de novo assembler using short paired-end reads	scientific article published on December 12, 2010

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instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

title

PE-Assembler: de novo assembler using short paired-end reads (English)

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

author

W-K Sung

series ordinal

2

object named as

Wing-Kin Sung

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21149345

retrieved

19 November 2024

author name string

Pramila Nuwantha Ariyaratne

series ordinal

1

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

language of work or name

English

0 references

publication date

12 December 2010

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

full work available at URL

https://academic.oup.com/bioinformatics/article-pdf/27/2/167/16899299/btq626.pdf

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Portable Document Format

online access status

open access

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21149345

retrieved

19 November 2024

http://bioinformatics.oxfordjournals.org/cgi/content/abstract/27/2/167

online access status

open access

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21149345

retrieved

19 November 2024

https://academic.oup.com/bioinformatics/article-pdf/27/2/167/48869315/bioinformatics_27_2_167.pdf

file format

Portable Document Format

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

published in

Bioinformatics

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

volume

27

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

issue

2

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

page(s)

167-174

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

cites work

ALLPATHS: de novo assembly of whole-genome shotgun microreads

series ordinal

1

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

De novo fragment assembly with short mate-paired reads: Does the read length matter?

series ordinal

2

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

SHARCGS, a fast and highly accurate short-read assembly algorithm for de novo genomic sequencing

series ordinal

3

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

Extending assembly of short DNA sequences to handle error.

series ordinal

4

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

De novo assembly of human genomes with massively parallel short read sequencing

series ordinal

6

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads

series ordinal

7

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

An Eulerian path approach to DNA fragment assembly

series ordinal

8

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

ABySS: a parallel assembler for short read sequence data

series ordinal

9

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

Assembling millions of short DNA sequences using SSAKE.

series ordinal

10

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

series ordinal

11

1 reference

stated in

Crossref

DOI

10.1093/BIOINFORMATICS/BTQ626

reference URL

https://api.crossref.org/works/10.1093/BIOINFORMATICS/BTQ626

retrieved

19 November 2024

Identifiers

DOI

10.1093/BIOINFORMATICS/BTQ626

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

DBLP publication ID

journals/bioinformatics/AriyaratneS11

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

PubMed publication ID

21149345

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21149345

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21149345%20AND%20SRC:MED&resulttype=core&format=json

retrieved

18 January 2020

 

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