Evaluation and application of RNA-Seq by MinION (Q62493086)

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scientific article published on 01 February 2019

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English	Evaluation and application of RNA-Seq by MinION	scientific article published on 01 February 2019

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instance of

scholarly article

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stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

title

Evaluation and application of RNA-Seq by MinION (English)

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

main subject

nanopore sequencing

0 references

transcriptome

0 references

RNA sequencing

1 reference

based on heuristic

inferred from title

RNA-Seq

1 reference

based on heuristic

inferred from title

author

Martin C Frith

series ordinal

9

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Sumio Sugano

series ordinal

7

object named as

Sumio Sugano

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Yutaka Suzuki

series ordinal

11

object named as

Yutaka Suzuki

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Katsuya Tsuchihara

series ordinal

10

object named as

Katsuya Tsuchihara

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Takashi Kohno

series ordinal

8

object named as

Takashi Kohno

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Junko Mizushima-Sugano

series ordinal

6

object named as

Junko Mizushima-Sugano

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Masahide Seki

series ordinal

1

object named as

Masahide Seki

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stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Sarun Sereewattanawoot

series ordinal

4

object named as

Sarun Sereewattanawoot

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

author name string

Eri Katsumata

series ordinal

2

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Ayako Suzuki

series ordinal

3

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

Yoshitaka Sakamoto

series ordinal

5

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

language of work or name

English

0 references

publication date

1 February 2019

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

published in

DNA Research

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

volume

26

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

issue

1

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

page(s)

55-65

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

copyright license

Creative Commons Attribution-NonCommercial 4.0 International

start time

21 November 2018

1 reference

stated in

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

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RNA-Seq: a revolutionary tool for transcriptomics

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Fast and accurate short read alignment with Burrows-Wheeler transform

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12 December 2020

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A framework for variation discovery and genotyping using next-generation DNA sequencing data

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12 December 2020

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Haplotype phasing: existing methods and new developments

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12 December 2020

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Smart-seq2 for sensitive full-length transcriptome profiling in single cells.

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Reliable identification of genomic variants from RNA-seq data

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12 December 2020

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The GNAS complex locus and human diseases associated with loss-of-function mutations or epimutations within this imprinted gene

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A single-molecule long-read survey of the human transcriptome

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PubMed

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12 December 2020

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Assessment of transcript reconstruction methods for RNA-seq

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30462165

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12 December 2020

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Aberrant transcriptional regulations in cancers: genome, transcriptome and epigenome analysis of lung adenocarcinoma cell lines

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Split-alignment of genomes finds orthologies more accurately.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/30462165

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12 December 2020

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PacBio Sequencing and Its Applications

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Coming of age: ten years of next-generation sequencing technologies

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Benchmarking of the Oxford Nanopore MinION sequencing for quantitative and qualitative assessment of cDNA populations

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12 December 2020

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The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community

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https://pubmed.ncbi.nlm.nih.gov/30462165

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Training alignment parameters for arbitrary sequencers with LAST-TRAIN.

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PubMed

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Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells.

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Long-term expansion of alveolar stem cells derived from human iPS cells in organoids.

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Nanopore sequencing and assembly of a human genome with ultra-long reads.

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Identifiers

DOI

10.1093/DNARES/DSY038

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

PMC publication ID

6379022

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

PubMed publication ID

30462165

1 reference

stated in

Europe PubMed Central

PMC publication ID

6379022

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30462165%20AND%20SRC:MED&resulttype=core&format=json

retrieved

4 May 2020

 

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