Identification of a New Antizyme mRNA +1 Frameshifting Stimulatory Pseudoknot in a Subset of Diverse Invertebrates and its Apparent Absence in Intermediate Species (Q64410762)

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article published in 2004

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English	Identification of a New Antizyme mRNA +1 Frameshifting Stimulatory Pseudoknot in a Subset of Diverse Invertebrates and its Apparent Absence in Intermediate Species	article published in 2004

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instance of

scholarly article

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title

Identification of a New Antizyme mRNA +1 Frameshifting Stimulatory Pseudoknot in a Subset of Diverse Invertebrates and its Apparent Absence in Intermediate Species (English)

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author

Ivaylo P Ivanov

object named as

Ivaylo P Ivanov

series ordinal

1

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John F Atkins

object named as

John F Atkins

series ordinal

4

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author name string

Christine B Anderson

series ordinal

2

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Raymond F Gesteland

series ordinal

3

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publication date

June 2004

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published in

Journal of Molecular Biology

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volume

339

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issue

3

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page(s)

495-504

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cites work

Evidence for an RNA pseudoknot loop-helix interaction essential for efficient -1 ribosomal frameshifting

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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Ornithine decarboxylase is degraded by the 26S proteasome without ubiquitination

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PubMed

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12 December 2020

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Identification and characterization of testis specific ornithine decarboxylase antizyme (OAZ-t) gene: expression in haploid germ cells and polyamine-induced frameshifting

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12 December 2020

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A mutant RNA pseudoknot that promotes ribosomal frameshifting in mouse mammary tumor virus

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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Analyses of ornithine decarboxylase antizyme mRNA with a cDNA cloned from rat liver

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PubMed

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Antizyme overexpression in transgenic mice reduces cell proliferation, increases apoptosis, and reduces N-nitrosomethylbenzylamine-induced forestomach carcinogenesis.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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Solution structure of a luteoviral P1-P2 frameshifting mRNA pseudoknot

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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Glypican-1 is a vehicle for polyamine uptake in mammalian cells: a pivital role for nitrosothiol-derived nitric oxide

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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Antizyme expression: a subversion of triplet decoding, which is remarkably conserved by evolution, is a sensor for an autoregulatory circuit

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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Structural probing and mutagenic analysis of the stem-loop required for Escherichia coli dnaX ribosomal frameshifting: programmed efficiency of 50%

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PubMed

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The sequences of and distance between two cis-acting signals determine the efficiency of ribosomal frameshifting in human immunodeficiency virus type 1 and human T-cell leukemia virus type II in vivo

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Comparative mutational analysis of cis-acting RNA signals for translational frameshifting in HIV-1 and HTLV-2.

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PubMed

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Contribution of the intercalated adenosine at the helical junction to the stability of the gag-pro frameshifting pseudoknot from mouse mammary tumor virus

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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Pseudoknots and the control of protein synthesis

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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Identification and analysis of the pseudoknot-containing gag-pro ribosomal frameshift signal of simian retrovirus-1.

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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Programmed frameshifting in the synthesis of mammalian antizyme is +1 in mammals, predominantly +1 in fission yeast, but -2 in budding yeast

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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Modernizing the tree of life

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Recoding: reprogrammed genetic decoding

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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inferred from PubMed ID database lookup

Polyamines regulate the expression of ornithine decarboxylase antizyme in vitro by inducing ribosomal frame-shifting

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A characteristic bent conformation of RNA pseudoknots promotes -1 frameshifting during translation of retroviral RNA.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of an efficient coronavirus ribosomal frameshifting signal: requirement for an RNA pseudoknot

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutational analysis of the RNA pseudoknot component of a coronavirus ribosomal frameshifting signal

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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inferred from PubMed ID database lookup

Antizyme is a target of sex-lethal in the Drosophila germline and appears to act downstream of hedgehog to regulate sex-lethal and cyclin B.

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PubMed

reference URL

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12 December 2020

based on heuristic

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Reading two bases twice: mammalian antizyme frameshifting in yeast.

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PubMed

reference URL

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12 December 2020

based on heuristic

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Determinants of proteasome recognition of ornithine decarboxylase, a ubiquitin-independent substrate

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A second mammalian antizyme: conservation of programmed ribosomal frameshifting

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

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Polyamines and prostatic cancer

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and functional studies of retroviral RNA pseudoknots involved in ribosomal frameshifting: nucleotides at the junction of the two stems are important for efficient ribosomal frameshifting.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and function of the stimulatory RNAs involved in programmed eukaryotic-1 ribosomal frameshifting

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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based on heuristic

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Discovery of a spermatogenesis stage-specific ornithine decarboxylase antizyme: antizyme 3

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the role of the pseudoknot component in the SRV-1 gag-pro ribosomal frameshift signal: loop lengths and stability of the stem regions

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of RNA elements that regulate gag-pol ribosomal frameshifting in equine infectious anemia virus

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/15147837

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based on heuristic

inferred from PubMed ID database lookup

Conservation of polyamine regulation by translational frameshifting from yeast to mammals

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cell culture analysis of the regulatory frameshift event required for the expression of mammalian antizymes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A dual-luciferase reporter system for studying recoding signals

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Autoregulatory frameshifting in decoding mammalian ornithine decarboxylase antizyme

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solution structure of the pseudoknot of SRV-1 RNA, involved in ribosomal frameshifting

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Secondary structure and mutational analysis of the ribosomal frameshift signal of rous sarcoma virus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The role of RNA pseudoknot stem 1 length in the promotion of efficient -1 ribosomal frameshifting

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of cellular polyamines by antizyme

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cloning and characterization of a rat gene encoding ornithine decarboxylase antizyme

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Properties of a polyamine transporter regulated by antizyme

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparative studies of frameshifting and nonframeshifting RNA pseudoknots: a mutational and NMR investigation of pseudoknots derived from the bacteriophage T2 gene 32 mRNA and the retroviral gag-pro frameshift site.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15147837

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1016/J.JMB.2004.03.082

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PMC publication ID

7125782

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PubMed publication ID

15147837

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