Emerging strategies and integrated systems microbiology technologies for biodiscovery of marine bioactive compounds. (Q33808968)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24918453%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

title

Emerging strategies and integrated systems microbiology technologies for biodiscovery of marine bioactive compounds (English)

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20 March 2020

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20 March 2020

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20 March 2020

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20 March 2020

Catriona Harrington

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20 March 2020

publication date

10 June 2014

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20 March 2020

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20 March 2020

volume

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issue

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20 March 2020

page(s)

3516-3559

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Creative Commons Attribution 4.0 International

20 March 2020

start time

10 June 2014

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April 2022 Public Data File from Crossref

copyrighted

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Proteogenomic analysis of a thermophilic bacterial consortium adapted to deconstruct switchgrass

4 July 2018

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Proteomics guided discovery of flavopeptins: anti-proliferative aldehydes synthesized by a reductase domain-containing non-ribosomal peptide synthetase

4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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PCR screening reveals considerable unexploited biosynthetic potential of ansamycins and a mysterious family of AHBA-containing natural products in actinomycetes

4 July 2018

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4 July 2018

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Cloning and characterization of a novel cold-active glycoside hydrolase family 1 enzyme with β-glucosidase, β-fucosidase and β-galactosidase activities

4 July 2018

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4 July 2018

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Assessment of the bacteriocinogenic potential of marine bacteria reveals lichenicidin production by seaweed-derived Bacillus spp

4 July 2018

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4 July 2018

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Synthetic biology triggers new era of antibiotics development.

4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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4 July 2018

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Isolation identification and biochemical characterization of a novel halo-tolerant lipase from the metagenome of the marine sponge Haliclona simulans

4 July 2018

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Enhanced multiplex genome engineering through co-operative oligonucleotide co-selection

4 July 2018

1 reference

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Antiviral activities and putative identification of compounds in microbial extracts from the Hawaiian coastal waters

4 July 2018

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Examining the fish microbiome: vertebrate-derived bacteria as an environmental niche for the discovery of unique marine natural products

4 July 2018

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Genomic mining for novel FADH₂-dependent halogenases in marine sponge-associated microbial consortia.

4 July 2018

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A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters.

4 July 2018

1 reference

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4 July 2018

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Isolation and initial characterization of a novel type of Baeyer-Villiger monooxygenase activity from a marine microorganism

4 July 2018

1 reference

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Indigenous hydrocarbon-utilizing bacterioflora in oil-polluted habitats in Kuwait, two decades after the greatest man-made oil spill

4 July 2018

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Effective gene collection from the metatranscriptome of marine microorganisms

4 July 2018

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Isolation of marine natural products.

4 July 2018

1 reference

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Combinatorial biosynthesis of polyketides--a perspective.

4 July 2018

1 reference

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Heterologous production of polyketides by modular type I polyketide synthases in Escherichia coli

4 July 2018

1 reference

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Synthetic biological approaches to natural product biosynthesis

4 July 2018

1 reference

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Systematics-guided bioprospecting for bioactive microbial natural products.

4 July 2018

1 reference

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A high-throughput screen to identify novel calcineurin inhibitors

4 July 2018

1 reference

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Deep sequencing reveals exceptional diversity and modes of transmission for bacterial sponge symbionts

4 July 2018

1 reference

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Meta-omic characterization of the marine invertebrate microbial consortium that produces the chemotherapeutic natural product ET-743

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Identification and characterization of novel esterases from a deep-sea sediment metagenome

4 July 2018

1 reference

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Transcriptome fingerprinting analysis: an approach to explore gene expression patterns in marine microbial communities

4 July 2018

1 reference

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Functional analysis of environmental DNA-derived type II polyketide synthases reveals structurally diverse secondary metabolites

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Precise manipulation of chromosomes in vivo enables genome-wide codon replacement

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Statistical research on marine natural products based on data obtained between 1985 and 2008

4 July 2018

1 reference

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Marine biocatalysts: enzymatic features and applications.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Identification of a new subfamily of salt-tolerant esterases from a metagenomic library of tidal flat sediment.

4 July 2018

1 reference

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Proteomics-based discovery of koranimine, a cyclic imine natural product

4 July 2018

1 reference

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Marine sponges and their microbial symbionts: love and other relationships

4 July 2018

1 reference

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Genetic Screening Strategy for Rapid Access to Polyether Ionophore Producers and Products in Actinomycetes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Molecular cloning and characterization of a new cold-active esterase from a deep-sea metagenomic library.

4 July 2018

1 reference

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Manufacturing molecules through metabolic engineering

4 July 2018

1 reference

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Immense essence of excellence: marine microbial bioactive compounds

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Identification and characterization of a novel fumarase gene by metagenome expression cloning from marine microorganisms

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Proteomic analysis of polyketide and nonribosomal peptide biosynthesis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Methods and options for the heterologous production of complex natural products.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Recent application of metagenomic approaches toward the discovery of antimicrobials and other bioactive small molecules

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Engineered polyketide biosynthesis and biocatalysis in Escherichia coli

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Substrate-Induced Gene Expression Screening: A Method for High-Throughput Screening of Metagenome Libraries

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

A nitrilase from a metagenomic library acts regioselectively on aliphatic dinitriles.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Cloning-independent expression and analysis of omega-transaminases by use of a cell-free protein synthesis system

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Single-cell genomics reveals the lifestyle of Poribacteria, a candidate phylum symbiotically associated with marine sponges

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Production of a new thiopeptide antibiotic, TP-1161, by a marine Nocardiopsis species.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Strategies for culture of 'unculturable' bacteria

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

SBSPKS: structure based sequence analysis of polyketide synthases

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Marine metagenomics: new tools for the study and exploitation of marine microbial metabolism.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Synthetic biology: applications come of age

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Approaches for novel enzyme discovery from marine environments

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

BACTIBASE second release: a database and tool platform for bacteriocin characterization

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Engineering fluorometabolite production: fluorinase expression in Salinispora tropica Yields Fluorosalinosporamide.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

GSTaxClassifier: a genomic signature based taxonomic classifier for metagenomic data analysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

MARTA: a suite of Java-based tools for assigning taxonomic status to DNA sequences.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Metagenomic approaches to natural products from free-living and symbiotic organisms

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

An orthogonal active site identification system (OASIS) for proteomic profiling of natural product biosynthesis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

A proteomics approach to discovering natural products and their biosynthetic pathways

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Deciphering pactamycin biosynthesis and engineered production of new pactamycin analogues.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Programming cells by multiplex genome engineering and accelerated evolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Drug discovery and natural products: end of an era or an endless frontier?

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

The chemical biology of modular biosynthetic enzymes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Automated genome mining for natural products.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

The biosynthetic logic of polyketide diversity

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Synthesis of methyl halides from biomass using engineered microbes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

A culture-dependent bacterial community structure analysis based on liquid cultivation and its application to a marine environment

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Isolation and characterization of metalloproteases with a novel domain structure by construction and screening of metagenomic libraries

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Efficient transfer of two large secondary metabolite pathway gene clusters into heterologous hosts by transposition

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Identification of two novel esterases from a marine metagenomic library derived from South China Sea.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Substrate-induced gene expression (SIGEX) screening of metagenome libraries

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Microarray-based characterization of microbial community functional structure and heterogeneity in marine sediments from the Gulf of Mexico

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

A latitudinal diversity gradient in planktonic marine bacteria

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Diversity of microbes associated with the marine sponge, Haliclona simulans, isolated from Irish waters and identification of polyketide synthase genes from the sponge metagenome.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Genome sequence of the streptomycin-producing microorganism Streptomyces griseus IFO 13350

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

SAR11 marine bacteria require exogenous reduced sulphur for growth

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

The RAST Server: rapid annotations using subsystems technology

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Isolation and characterization of alkane hydroxylases from a metagenomic library of Pacific deep-sea sediment

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Prokaryotic taxonomy and phylogeny in the genomic era: advancements and challenges ahead

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Sponge-associated microorganisms: evolution, ecology, and biotechnological potential

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Combinatorial biosynthesis for drug development

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Matching phylogeny and metabolism in the uncultured marine bacteria, one cell at a time

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Molecular basis for chloronium-mediated meroterpene cyclization: cloning, sequencing, and heterologous expression of the napyradiomycin biosynthetic gene cluster

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

CAMERA: a community resource for metagenomics

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Metagenomic approach for the isolation of a novel low-temperature-active lipase from uncultured bacteria of marine sediment

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

MEGAN analysis of metagenomic data

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Carrier protein structure and recognition in polyketide and nonribosomal peptide biosynthesis.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Subtractive hybridization magnetic bead capture: a new technique for the recovery of full-length ORFs from the metagenome

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

MetaGene: prokaryotic gene finding from environmental genome shotgun sequences

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

A comparison of stable-isotope probing of DNA and phospholipid fatty acids to study prokaryotic functional diversity in sulfate-reducing marine sediment enrichment slurries

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Assembly-line enzymology for polyketide and nonribosomal Peptide antibiotics: logic, machinery, and mechanisms.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Microbial diversity in the deep sea and the underexplored "rare biosphere"

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Total biosynthesis of antitumor nonribosomal peptides in Escherichia coli.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Diversity and biocatalytic potential of epoxide hydrolases identified by genome analysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Identification and phylogenetic analysis of toxigenic cyanobacteria by multiplex randomly amplified polymorphic DNA PCR.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

FastGroupII: a web-based bioinformatics platform for analyses of large 16S rDNA libraries

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Metaproteomics: studying functional gene expression in microbial ecosystems

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Isolation of Typical Marine Bacteria by Dilution Culture: Growth, Maintenance, and Characteristics of Isolates under Laboratory Conditions.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Sequence and expression analyses of Cytophaga-like hydrolases in a Western arctic metagenomic library and the Sargasso Sea.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Coupling 16S-ITS rDNA clone libraries and automated ribosomal intergenic spacer analysis to show marine microbial diversity: development and application to a time series

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Culturability and coexistence of colony-forming and single-cell marine bacterioplankton

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Heterologous expression of novobiocin and clorobiocin biosynthetic gene clusters

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Marine sponges as pharmacy

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Metagenomics: application of genomics to uncultured microorganisms

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Metagenomics: genomic analysis of microbial communities

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

In vivo production of artificial nonribosomal peptide products in the heterologous host Escherichia coli

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Exploring nitrilase sequence space for enantioselective catalysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

GC fractionation enhances microbial community diversity assessment and detection of minority populations of bacteria by denaturing gradient gel electrophoresis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Polyketide and nonribosomal peptide antibiotics: modularity and versatility

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Ecophysiological interaction between nitrifying bacteria and heterotrophic bacteria in autotrophic nitrifying biofilms as determined by microautoradiography-fluorescence in situ hybridization

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Environmental genome shotgun sequencing of the Sargasso Sea

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Biosynthesis of Yersiniabactin, a complex polyketide-nonribosomal peptide, using Escherichia coli as a heterologous host

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Stable-isotope probing of nucleic acids: a window to the function of uncultured microorganisms

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Resolving functional diversity in relation to microbial community structure in soil: exploiting genomics and stable isotope probing

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Microarrays for bacterial detection and microbial community analysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Synthesis of long-chain fatty acid enol esters isolated from an environmental DNA clone

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Cultivating the uncultured

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Isolation of antibiotics turbomycin a and B from a metagenomic library of soil microbial DNA

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Cultivation of the ubiquitous SAR11 marine bacterioplankton clade.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Microbial diversity and function in soil: from genes to ecosystems

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Isolating "uncultivable" microorganisms in pure culture in a simulated natural environment

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Exploring prokaryotic diversity in the genomic era

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Biosynthesis of complex polyketides in a metabolically engineered strain of E. coli

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Genomes OnLine Database (GOLD): a monitor of genome projects world-wide

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Community composition of marine bacterioplankton determined by 16S rRNA gene clone libraries and fluorescence in situ hybridization

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Novel natural products from soil DNA libraries in a streptomycete host

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Use of randomly amplified polymorphic DNA as a means of developing genus- and strain-specific Streptomyces DNA probes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Microbial diversity in marine sediments from Sagami Bay and Tokyo Bay, Japan, as determined by 16S rRNA gene analysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Optimization of terminal-restriction fragment length polymorphism analysis for complex marine bacterioplankton communities and comparison with denaturing gradient gel electrophoresis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Quantifying microbial diversity: morphotypes, 16S rRNA genes, and carotenoids of oxygenic phototrophs in microbial mats

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Prokaryotes: the unseen majority

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Characterization of the dominant and rare members of a young Hawaiian soil bacterial community with small-subunit ribosomal DNA amplified from DNA fractionated on the basis of its guanine and cytosine composition.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

GeneMark.hmm: new solutions for gene finding

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Dominant marine bacterioplankton species found among colony-forming bacteria

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Engineered biosynthesis of a complete macrolactone in a heterologous host

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Expression of a functional fungal polyketide synthase in the bacterium Streptomyces coelicolor A3(2)

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Improved tools for biological sequence comparison

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Basic local alignment search tool

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

A bacterial laccase from marine microbial metagenome exhibiting chloride tolerance and dye decolorization ability

4 July 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Metabolic engineering of Agrobacterium sp. strain ATCC 31749 for production of an alpha-Gal epitope

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Purification and characterization of a dehalogenase from Pseudomonas stutzeri DEH130 isolated from the marine sponge Hymeniacidon perlevis

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Characterisation of an L-haloacid dehalogenase from the marine psychrophile Psychromonas ingrahamii with potential industrial application

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Production of xylanase by an alkaline-tolerant marine-derived Streptomyces viridochromogenes strain and improvement by ribosome engineering

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Cultivating previously uncultured soil bacteria using a soil substrate membrane system

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Evidence of bacteriophage-mediated horizontal transfer of bacterial 16S rRNA genes in the viral metagenome of the marine sponge Hymeniacidon perlevis.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Application and validation of DNA microarrays for the 16S rRNA-based analysis of marine bacterioplankton.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Viable but nonculturable bacteria: a survival strategy.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Proteogenomic approaches for the molecular characterization of natural microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Proteogenomic definition of biomarkers for the large Roseobacter clade and application for a quick screening of new environmental isolates.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Transcriptional responses of surface water marine microbial assemblages to deep-sea water amendment

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Bioactive polyhydroxylated sterols from the marine sponge Haliclona crassiloba.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

antiSMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Genomic sequence-based discovery of novel angucyclinone antibiotics from marine Streptomyces sp. W007.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

A genomics-guided approach for discovering and expressing cryptic metabolic pathways.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Identification of elaiophylin derivatives from the marine-derived actinomycete Streptomyces sp. 7-145 using PCR-based screening

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

A genomic screening approach to the structure-guided identification of drug candidates from natural sources.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

The screening of antimicrobial bacteria with diverse novel nonribosomal peptide synthetase (NRPS) genes from South China sea sponges

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Non-ribosomal peptide synthetase module fusions to produce derivatives of daptomycin in Streptomyces roseosporus

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Biocatalytic retrosynthesis

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

TREX: a universal tool for the transfer and expression of biosynthetic pathways in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

The granaticin biosynthetic gene cluster of Streptomyces violaceoruber Tü22: sequence analysis and expression in a heterologous host

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Cloning, sequencing and heterologous expression of the medermycin biosynthetic gene cluster of Streptomyces sp. AM-7161: towards comparative analysis of the benzoisochromanequinone gene clusters

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Cloning and heterologous expression of the epothilone gene cluster.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Engineered biosynthesis of a novel amidated polyketide, using the malonamyl-specific initiation module from the oxytetracycline polyketide synthase

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Heterologous production of daptomycin in Streptomyces lividans.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Heterologous production of epothilone C and D in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Chemical dereplication of marine actinomycetes by liquid chromatography-high resolution mass spectrometry profiling and statistical analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Applicability of combined amplified ribosomal DNA restriction analysis (ARDRA) patterns in bacterial phylogeny and taxonomy

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Kernel based machine learning algorithm for the efficient prediction of type III polyketide synthase family of proteins.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Use of real-time qPCR to quantify members of the unculturable heterotrophic bacterial community in a deep sea marine sponge, Vetulina sp

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4071589

Culture-independent and -dependent methods to investigate the diversity of planktonic bacteria in the northern Bering Sea

30 October 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.3390%2FMD12063516

21 January 2018

Marine natural products

1 reference

12 December 2020

Marine natural products

1 reference

12 December 2020

Detergent compatible alkaline lipase produced by marine Bacillus smithii BTMS 11

1 reference

12 December 2020

Amylase enzyme from Bacillus subtilis S8-18: a potential desizing agent from the marine environment

1 reference

12 December 2020

Retrieval of Full-Length Functional Genes Using Subtractive Hybridization Magnetic Bead Capture

1 reference

12 December 2020

Extracellular production of novel halotolerant, thermostable, and alkali-stable carboxymethyl cellulase by marine bacterium Marinimicrobium sp. LS-A18

1 reference

12 December 2020

Retrosynthetic Design of Heterologous Pathways

1 reference

12 December 2020

Identifiers

DOI

10.3390/MD12063516

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24918453%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24918453%20AND%20SRC:MED&resulttype=core&format=json

20 March 2020

PubMed publication ID

24918453

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24918453%20AND%20SRC:MED&resulttype=core&format=json