Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses (Q39455181)

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English	Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

12 September 2017

Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses (English)

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Europe PubMed Central

PubMed publication ID

12 September 2017

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based on heuristic

inferred from title

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based on heuristic

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object named as

Kabin Xie

2

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object named as

Lizhong Xiong

3

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author name string

Jianqiang Shen

1

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Europe PubMed Central

PubMed publication ID

12 September 2017

publication date

13 October 2010

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Europe PubMed Central

PubMed publication ID

12 September 2017

Molecular Genetics and Genomics

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Europe PubMed Central

PubMed publication ID

12 September 2017

284

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Europe PubMed Central

PubMed publication ID

12 September 2017

6

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Europe PubMed Central

PubMed publication ID

12 September 2017

477-488

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Europe PubMed Central

PubMed publication ID

12 September 2017

Profiling microRNA expression in Arabidopsis pollen using microRNA array and real-time PCR

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Normalization of microRNA expression levels in quantitative RT-PCR assays: identification of suitable reference RNA targets in normal and cancerous human solid tissues

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https://pubmed.ncbi.nlm.nih.gov/20941508

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Direct detection and quantification of microRNAs

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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A homolog of human ski-interacting protein in rice positively regulates cell viability and stress tolerance

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https://pubmed.ncbi.nlm.nih.gov/20941508

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Protocol: a highly sensitive RT-PCR method for detection and quantification of microRNAs

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Real-time quantification of microRNAs by stem-loop RT-PCR

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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MicroRNA promoter element discovery in Arabidopsis

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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Stress-responsive microRNAs in Populus.

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Over-expression of osa-MIR396c decreases salt and alkali stress tolerance

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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PlantGDB, plant genome database and analysis tools

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https://pubmed.ncbi.nlm.nih.gov/20941508

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Origin, biogenesis, and activity of plant microRNAs

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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Plant MPSS databases: signature-based transcriptional resources for analyses of mRNA and small RNA

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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Microarray-based analysis of stress-regulated microRNAs in Arabidopsis thaliana

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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Profiling of cold-stress-responsive miRNAs in rice by microarrays.

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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A sensitive array for microRNA expression profiling (miChip) based on locked nucleic acids (LNA)

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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Genomic organization, differential expression, and interaction of SQUAMOSA promoter-binding-like transcription factors and microRNA156 in rice.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cloning and characterization of microRNAs from rice

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Salt and drought stress signal transduction in plants

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Members of miR-169 family are induced by high salinity and transiently inhibit the NF-YA transcription factor

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Highly specific gene silencing by artificial miRNAs in rice

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Global genome expression analysis of rice in response to drought and high-salinity stresses in shoot, flag leaf, and panicle

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Real-time quantitative RT-PCR: design, calculations, and statistics.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Identification by Real-time PCR of 13 mature microRNAs differentially expressed in colorectal cancer and non-tumoral tissues

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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A new mathematical model for relative quantification in real-time RT-PCR

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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CSRDB: a small RNA integrated database and browser resource for cereals

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Computational identification of plant microRNAs and their targets, including a stress-induced miRNA

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Eleven golden rules of quantitative RT-PCR.

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

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Design considerations and effects of LNA in PCR primers

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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The Arabidopsis NFYA5 transcription factor is regulated transcriptionally and posttranscriptionally to promote drought resistance.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ABA induction of miR159 controls transcript levels of two MYB factors during Arabidopsis seed germination

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Loss of function of OsDCL1 affects microRNA accumulation and causes developmental defects in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Suppression of the microRNA pathway by bacterial effector proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of novel and candidate miRNAs in rice by high throughput sequencing

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

miRBase: tools for microRNA genomics

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https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An oligonucleotide microchip for genome-wide microRNA profiling in human and mouse tissues

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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A novel and universal method for microRNA RT-qPCR data normalization

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Relative expression software tool (REST©) for group-wise comparison and statistical analysis of relative expression results in real-time PCR

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Facile means for quantifying microRNA expression by real-time PCR

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits microRNAs and short interfering RNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The TIGR Rice Genome Annotation Resource: improvements and new features

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of drought-induced microRNAs in rice

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

miRBase: microRNA sequences, targets and gene nomenclature

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Plant cis-acting regulatory DNA elements (PLACE) database: 1999

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR data

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

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Identification of novel stress-regulated microRNAs from Oryza sativa L.

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

MicroRNA expression detected by oligonucleotide microarrays: system establishment and expression profiling in human tissues

1 reference

https://pubmed.ncbi.nlm.nih.gov/20941508

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S00438-010-0581-0

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Europe PubMed Central

PubMed publication ID

12 September 2017

release_je5tvr75vrfjvktbmepkwzlgxu

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PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

12 September 2017

ResearchGate publication ID

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