PlantGDB, plant genome database and analysis tools (Q34927332)

5 August 2017

title

PlantGDB, plant genome database and analysis tools (English)

1 reference

5 August 2017

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Qunfeng Dong

1 reference

5 August 2017

Shannon D Schlueter

series ordinal

1 reference

5 August 2017

Volker Brendel

series ordinal

1 reference

5 August 2017

language of work or name

English

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publication date

1 January 2004

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5 August 2017

published in

Nucleic Acids Research

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5 August 2017

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5 August 2017

issue

Database issue

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5 August 2017

page(s)

D354-9

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describes a project that uses

5 August 2017

SQL

1 reference

26 June 2022

https://europepmc.org/article/PMC/PMC308780

based on heuristic

inferred from PubMed Central ID database lookup

cites work

MaizeGDB, the community database for maize genetics and genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Identification, characterization and molecular phylogeny of U12-dependent introns in the Arabidopsis thaliana genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

GeneSeqer@PlantGDB: Gene structure prediction in plant genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Efficient clustering of large EST data sets on parallel computers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

ZmDB, an integrated database for maize genome research

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

The Arabidopsis Information Resource (TAIR): a model organism database providing a centralized, curated gateway to Arabidopsis biology, research materials and community

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

The Stanford Microarray Database: data access and quality assessment tools

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Gramene, a tool for grass genomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

The Maize Genome Sequencing Project

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Microevolutionary genomics of bacteria

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Identification, analysis, and utilization of conserved ortholog set markers for comparative genomics in higher plants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Comparison of RNA expression profiles based on maize expressed sequence tag frequency analysis and micro-array hybridization

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

CAP3: A DNA sequence assembly program

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Refined annotation of the Arabidopsis genome by complete expressed sequence tag mapping

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

Syntenic relationships between Medicago truncatula and Arabidopsis reveal extensive divergence of genome organization

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant genomes

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308780

26 October 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/14681433

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Summaries of legume genomics projects from around the globe. Community resources for crops and models

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14681433

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKH046

1 reference

5 August 2017

DBLP publication ID

journals/nar/DongSB04

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

5 August 2017

1 reference