Phenotypic evolution through variation in splicing of the noncoding RNA COOLAIR. (Q39319291)

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3 March 2020

title

Phenotypic evolution through variation in splicing of the noncoding RNA COOLAIR (English)

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3 March 2020

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3 March 2020

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3 March 2020

Zhen Tao

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3 March 2020

publication date

24 March 2015

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3 March 2020

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3 March 2020

volume

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3 March 2020

issue

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3 March 2020

page(s)

696-701

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Antisense COOLAIR mediates the coordinated switching of chromatin states at FLC during vernalization

3 March 2020

cites work

1 reference

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Multiple FLC haplotypes defined by independent cis-regulatory variation underpin life history diversity in Arabidopsis thaliana

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Evolutionary conservation of cold-induced antisense RNAs of FLOWERING LOCUS C in Arabidopsis thaliana perennial relatives

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Antisense-mediated FLC transcriptional repression requires the P-TEFb transcription elongation factor

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Functional consequences of splicing of the antisense transcript COOLAIR on FLC transcription

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Genetic architecture of naturally occurring quantitative traits in plants: an updated synthesis

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Coupling mRNA processing with transcription in time and space.

11 September 2017

1 reference

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Contributions of protein-coding and regulatory change to adaptive molecular evolution in murid rodents

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Gene expression is circular: factors for mRNA degradation also foster mRNA synthesis

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

GENESTAT: an information portal for design and analysis of genetic association studies

11 September 2017

1 reference

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Variation in the epigenetic silencing of FLC contributes to natural variation in Arabidopsis vernalization response

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time.

11 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Antagonistic roles for H3K36me3 and H3K27me3 in the cold-induced epigenetic switch at Arabidopsis FLC.

11 September 2017

1 reference

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How to activate a gene: decap its associated noncoding RNA.

17 June 2018

1 reference

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Protocol: A simple phenol-based method for 96-well extraction of high quality RNA from Arabidopsis

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Flowering time QTL in natural populations of Arabidopsis thaliana and implications for their adaptive value.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

The yeast cap binding complex modulates transcription factor recruitment and establishes proper histone H3K36 trimethylation during active transcription

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

The spen family protein FPA controls alternative cleavage and polyadenylation of RNA.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Targeted 3' processing of antisense transcripts triggers Arabidopsis FLC chromatin silencing.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

FRIGIDA delays flowering in Arabidopsis via a cotranscriptional mechanism involving direct interaction with the nuclear cap-binding complex

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

The Arabidopsis RNA-binding protein FCA requires a lysine-specific demethylase 1 homolog to downregulate FLC.

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

Quantitative Modulation of Polycomb Silencing Underlies Natural Variation in Vernalization

21 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4387712

2 December 2018

Identifiers

DOI

10.1101/GAD.258814.115

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release_arn3ayty7bgl7gi6jfq5ydbuti

3 March 2020

Fatcat ID

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Fatcat

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mapped directly with Wikidata item

24 November 2022

based on heuristic

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3 March 2020

PubMed publication ID

25805848

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