Hybrid Approaches to Structural Characterization of Conformational Ensembles of Complex Macromolecular Systems Combining NMR Residual Dipolar Couplings and Solution X-ray Scattering. (Q38688852)

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scientific article published on 7 January 2016

Language	Label	Description	Also known as
English	Hybrid Approaches to Structural Characterization of Conformational Ensembles of Complex Macromolecular Systems Combining NMR Residual Dipolar Couplings and Solution X-ray Scattering.	scientific article published on 7 January 2016

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scholarly article

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4 March 2020

Hybrid Approaches to Structural Characterization of Conformational Ensembles of Complex Macromolecular Systems Combining NMR Residual Dipolar Couplings and Solution X-ray Scattering (English)

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4 March 2020

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based on heuristic

inferred from title

X-ray scattering techniques

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based on heuristic

inferred from title

G. Marius Clore

3

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4 March 2020

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Vincenzo Venditti

1

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4 March 2020

Timothy K Egner

2

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publication date

7 January 2016

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Chemical Reviews

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116

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6305-6322

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Addition of missing loops and domains to protein models by x-ray solution scattering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Structure and dynamics of KH domains from FBP bound to single-stranded DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Using conjoined rigid body/torsion angle simulated annealing to determine the relative orientation of covalently linked protein domains from dipolar couplings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Changes in biomolecular conformation seen by small angle X-ray scattering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Partial alignment of biomolecules: an aid to NMR characterization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Application of dipolar coupling data to the refinement of the solution structure of the sarcin-ricin loop RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Dipolar couplings in macromolecular structure determination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Analysis of slow interdomain motion of macromolecules using NMR relaxation data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Recent advances in FRET: distance determination in protein-DNA complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Solution NMR of proteins within polyacrylamide gels: diffusional properties and residual alignment by mechanical stress or embedding of oriented purple membranes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Crystal and solution structures of an HslUV protease-chaperone complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Accurate and rapid docking of protein-protein complexes on the basis of intermolecular nuclear overhauser enhancement data and dipolar couplings by rigid body minimization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Filamentous bacteriophage for aligning RNA, DNA, and proteins for measurement of nuclear magnetic resonance dipolar coupling interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Folding and binding cascades: shifts in energy landscapes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Polymer principles and protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Tunable alignment of macromolecules by filamentous phage yields dipolar coupling interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Solution structure of cyanovirin-N, a potent HIV-inactivating protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

A robust method for determining the magnitude of the fully asymmetric alignment tensor of oriented macromolecules in the absence of structural information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

The use of 2H, 13C, 15N multidimensional NMR to study the structure and dynamics of proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

New methods of structure refinement for macromolecular structure determination by NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Measurement of J and dipolar couplings from simplified two-dimensional NMR spectra

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Determining the structures of large proteins and protein complexes by NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Use of dipolar 1H-15N and 1H-13C couplings in the structure determination of magnetically oriented macromolecules in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Enzyme I: the first protein and potential regulator of the bacterial phosphoenolpyruvate: glycose phosphotransferase system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Solution structure of the 30 kDa N-terminal domain of enzyme I of the Escherichia coli phosphoenolpyruvate:sugar phosphotransferase system by multidimensional NMR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

The first step in sugar transport: crystal structure of the amino terminal domain of enzyme I of the E. coli PEP: sugar phosphotransferase system and a model of the phosphotransfer complex with HPr

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Importance of the carboxyl-terminal domain of enzyme I of the Escherichia coli phosphoenolpyruvate: sugar phosphotransferase system for phosphoryl donor specificity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Measurement of homo- and heteronuclear J couplings from quantitative J correlation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

The bacterial phosphoenolpyruvate: glycose phosphotransferase system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

The Energy Landscapes and Motions of Proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Sugar transport by the bacterial phosphotransferase system. Structural and thermodynamic domains of enzyme I of Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

23 June 2018

Comment on "A Tensor-Free Method for the Structural and Dynamic Refinement of Proteins using Residual Dipolar Couplings".

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Time- and ensemble-averaged direct NOE restraints

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

High resolution measurement of methyl 13C(m)-13C and 1H(m)-13C(m) residual dipolar couplings in large proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

NMR: prediction of molecular alignment from structure using the PALES software

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

A 9 keV electron-impact liquid-gallium-jet x-ray source

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

How random is a highly denatured protein?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Structure of the full-length enzyme I of the phosphoenolpyruvate-dependent sugar phosphotransferase system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Conformational fluctuations affect protein alignment in dilute liquid crystal media.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Evaluation of backbone proton positions and dynamics in a small protein by liquid crystal NMR spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Determination of protein structures consistent with NMR order parameters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Orientation restraints in molecular dynamics simulations using time and ensemble averaging

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Cross-correlated relaxation enhanced 1H[bond]13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Multiplet component separation for measurement of methyl 13C-1H dipolar couplings in weakly aligned proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Protein crystallography with neutrons--status and perspectives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

Identification by NMR of the binding surface for the histidine-containing phosphocarrier protein HPr on the N-terminal domain of enzyme I of the Escherichia coli phosphotransferase system.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

31 August 2018

High-Accuracy Residual1HN−13C and1HN−1HNDipolar Couplings in Perdeuterated Proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

3 December 2018

Selective Methyl Group Protonation of Perdeuterated Proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5590664

3 December 2018

Using chemical shifts to determine structural changes in proteins upon complex formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A simple apparatus for generating stretched polyacrylamide gels, yielding uniform alignment of proteins and detergent micelles

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Local structure due to an aromatic-amide interaction observed by 1H-nuclear magnetic resonance spectroscopy in peptides related to the N terminus of bovine pancreatic trypsin inhibitor

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Concordance of residual dipolar couplings, backbone order parameters and crystallographic B-factors for a small alpha/beta protein: a unified picture of high probability, fast atomic motions in proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Variation of molecular alignment as a means of resolving orientational ambiguities in protein structures from dipolar couplings

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural analysis of flexible proteins in solution by small angle X-ray scattering combined with crystallography

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Rapid identification of medium- to large-scale interdomain motion in modular proteins using dipolar couplings

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Lanthanide induced residual dipolar couplings for the conformational investigation of peripheral 15NH2 moieties

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural Interpretation of Hydrogen Exchange Protection Factors in Proteins: Characterization of the Native State Fluctuations of CI2

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein interactions studied by SAXS: effect of ionic strength and protein concentration for BSA in aqueous solutions

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role of electrostatic interactions in transient encounter complexes in protein-protein association investigated by paramagnetic relaxation enhancement

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Direct refinement against proton-proton dipolar couplings in NMR structure determination of macromolecules

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Reweighted atomic densities to represent ensembles of NMR structures

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Improved dilute bicelle solutions for high-resolution NMR of biological macromolecules

1 reference

https://pubmed.ncbi.nlm.nih.gov/26739383

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/ACS.CHEMREV.5B00592

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26739383%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26739383%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26739383%20AND%20SRC:MED&resulttype=core&format=json

4 March 2020

ResearchGate publication ID

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