E-RNAi: a web application for the multi-species design of RNAi reagents--2010 update (Q38373756)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20444868%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

title

E-RNAi: a web application for the multi-species design of RNAi reagents--2010 update (English)

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1 February 2020

1 reference

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1 February 2020

Thomas Horn

1 reference

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1 February 2020

language of work or name

English

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publication date

5 May 2010

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1 February 2020

published in

Nucleic Acids Research

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volume

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issue

Web Server issue

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1 February 2020

page(s)

W332-9

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Creative Commons Attribution-NonCommercial 2.5 Generic

1 February 2020

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyrighted

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cites work

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

The art and design of genetic screens: RNA interference.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Specialization and evolution of endogenous small RNA pathways

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

sIR: siRNA Information Resource, a web-based tool for siRNA sequence design and analysis and an open access siRNA database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Evidence of off-target effects associated with long dsRNAs in Drosophila melanogaster cell-based assays

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

3' UTR seed matches, but not overall identity, are associated with RNAi off-targets

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Design of a genome-wide siRNA library using an artificial neural network

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

E-RNAi: a web application to design optimized RNAi constructs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

DEQOR: a web-based tool for the design and quality control of siRNAs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Rational siRNA design for RNA interference

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

The generic genome browser: a building block for a model organism system database

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

BLAT—The BLAST-Like Alignment Tool

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Role for a bidentate ribonuclease in the initiation step of RNA interference

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Use of double-stranded RNA interference in Drosophila cell lines to dissect signal transduction pathways.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Primer3 on the WWW for general users and for biologist programmers

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Basic local alignment search tool

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Selection of hyperfunctional siRNAs with improved potency and specificity

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Prevalence of off-target effects in Drosophila RNA interference screens

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

RNA secondary structure analysis using the Vienna RNA package

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

The impact of target site accessibility on the design of effective siRNAs

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Experimental validation of the importance of seed complement frequency to siRNA specificity

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2896145

Minimizing the risk of reporting false positives in large-scale RNAi screens

31 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKQ317

MEPE/OF45 protects cells from DNA damage induced killing via stabilizing CHK1.

21 January 2018

1 reference

30 December 2023

https://opencitations.net/index/api/v1/citations/10.1093/NAR/GKP768

Identifiers

DOI

10.1093/NAR/GKQ317

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20444868%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20444868%20AND%20SRC:MED&resulttype=core&format=json

1 February 2020

PubMed publication ID

20444868

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20444868%20AND%20SRC:MED&resulttype=core&format=json