Development of an alfalfa SNP array and its use to evaluate patterns of population structure and linkage disequilibrium (Q37458563)

20 August 2017

Development of an alfalfa SNP array and its use to evaluate patterns of population structure and linkage disequilibrium (English)

1 reference

20 August 2017

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linkage disequilibrium

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Maria J Monteros

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Xuehui Li

1 reference

20 August 2017

Yuanhong Han

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20 August 2017

Yanling Wei

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20 August 2017

Ananta Acharya

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20 August 2017

Andrew D Farmer

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20 August 2017

Julie Ho

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20 August 2017

E Charles Brummer

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20 August 2017

language of work or name

English

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publication date

9 January 2014

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20 August 2017

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20 August 2017

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20 August 2017

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20 August 2017

e84329

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Creative Commons Attribution 4.0 International

20 August 2017

start time

9 January 2014

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April 2022 Public Data File from Crossref

copyrighted

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cites work

Retrospective view of North American potato (Solanum tuberosum L.) breeding in the 20th and 21st centuries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Prevalence of single nucleotide polymorphism among 27 diverse alfalfa genotypes as assessed by transcriptome sequencing

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

High-density SNP genotyping of tomato (Solanum lycopersicum L.) reveals patterns of genetic variation due to breeding.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Development and evaluation of a 9K SNP array for peach by internationally coordinated SNP detection and validation in breeding germplasm

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Patterns of linkage disequilibrium and association mapping in diploid alfalfa (M. sativa L.).

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Genome-wide SNP detection, validation, and development of an 8K SNP array for apple

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

SNP discovery and development of a high-density genotyping array for sunflower

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Genomic selection in plant breeding: from theory to practice

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Genomic and expression plasticity of polyploidy

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Factors affecting accuracy from genomic selection in populations derived from multiple inbred lines: a Barley case study

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Phenotypic and transcriptomic changes associated with potato autopolyploidization

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

The use of molecular genetics in the improvement of agricultural populations.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Prediction of total genetic value using genome-wide dense marker maps

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

TASSEL: software for association mapping of complex traits in diverse samples

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Linkage disequilibrium and homozygosity of chromosome segments in finite populations

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Complex patterns of autopolyploid evolution in alfalfa and allies (Medicago sativa; Leguminosae).

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Association of a CONSTANS-LIKE gene to flowering and height in autotetraploid alfalfa

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Inferring population structure and genetic diversity of broad range of wild diploid alfalfa (Medicago sativa L.) accessions using SSR markers

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Identification of QTL for resistance and susceptibility to Stagonospora meliloti in autotetraploid lucerne.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

The Scree Test For The Number Of Factors

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3887001

Prospects for genomic selection in forage plant species

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0084329

Domestication history in the Medicago sativa species complex: inferences from nuclear sequence polymorphism

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24416217

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Variances and covariances of squared linkage disequilibria in finite populations

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24416217

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Accuracy of genotypic value predictions for marker-based selection in biparental plant populations

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24416217

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0084329

1 reference

20 August 2017

0 references

1 reference

20 August 2017

PubMed publication ID

24416217

1 reference