Prevalence of single nucleotide polymorphism among 27 diverse alfalfa genotypes as assessed by transcriptome sequencing (Q34459695)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23107476%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

title

Prevalence of single nucleotide polymorphism among 27 diverse alfalfa genotypes as assessed by transcriptome sequencing (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23107476%20AND%20SRC:MED&resulttype=core&format=json

single-nucleotide polymorphism

16 February 2020

main subject

transcriptome

0 references

1 reference

1 reference

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16 February 2020

Xuehui Li

1 reference

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16 February 2020

Ananta Acharya

1 reference

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16 February 2020

Andrew D Farmer

1 reference

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16 February 2020

John A Crow

1 reference

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16 February 2020

Arvind K Bharti

1 reference

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16 February 2020

Robin S Kramer

1 reference

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16 February 2020

Yanling Wei

1 reference

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16 February 2020

Yuanhong Han

1 reference

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16 February 2020

Jiqing Gou

1 reference

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16 February 2020

Gregory D May

1 reference

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16 February 2020

E Charles Brummer

1 reference

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16 February 2020

language of work or name

English

0 references

publication date

29 October 2012

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16 February 2020

1 reference

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16 February 2020

volume

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16 February 2020

page(s)

568

1 reference

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High-resolution melting analysis for SNP genotyping and mapping in tetraploid alfalfa (Medicago sativa L.).

16 February 2020

cites work

1 reference

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The Medicago genome provides insight into the evolution of rhizobial symbioses

6 July 2018

1 reference

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Genetic architecture of aluminum tolerance in rice (Oryza sativa) determined through genome-wide association analysis and QTL mapping

6 July 2018

1 reference

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Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis

6 July 2018

1 reference

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Single nucleotide polymorphism discovery in elite North American potato germplasm

6 July 2018

1 reference

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Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems

6 July 2018

1 reference

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Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology.

6 July 2018

1 reference

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Association genetics of complex traits in plants

6 July 2018

1 reference

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SNP discovery by high-throughput sequencing in soybean

6 July 2018

1 reference

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Management of High-Throughput DNA Sequencing Projects: Alpheus

6 July 2018

1 reference

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Fast and SNP-tolerant detection of complex variants and splicing in short reads

6 July 2018

1 reference

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Rapid genomic characterization of the genus vitis

6 July 2018

1 reference

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CD-HIT Suite: a web server for clustering and comparing biological sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533575

ABySS: a parallel assembler for short read sequence data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533575

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome

6 July 2018

1 reference

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Dendroscope: An interactive viewer for large phylogenetic trees

6 July 2018

1 reference

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Quantitative trait loci and candidate gene mapping of aluminum tolerance in diploid alfalfa

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533575

An expressed sequence tag SSR map of tetraploid alfalfa (Medicago sativa L.).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533575

GMAP: a genomic mapping and alignment program for mRNA and EST sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533575

Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3533575

A sequence-based genetic map of Medicago truncatula and comparison of marker colinearity with M. sativa

6 July 2018

1 reference

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Construction of two genetic linkage maps in cultivated tetraploid alfalfa (Medicago sativa) using microsatellite and AFLP markers

6 July 2018

1 reference

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InterProScan--an integration platform for the signature-recognition methods in InterPro

6 July 2018

1 reference

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An improvement of the single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction

6 July 2018

1 reference

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Prevalence of segregation distortion in diploid alfalfa and its implications for genetics and breeding applications

6 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-568

Genome-wide association studies of 14 agronomic traits in rice landraces.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-568

Genome-wide association study of quantitative resistance to southern leaf blight in the maize nested association mapping population

21 January 2018

1 reference

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Population structure and combining ability of diverse Medicago sativa germplasms.

21 January 2018

1 reference

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Inferring population structure and genetic diversity of broad range of wild diploid alfalfa (Medicago sativa L.) accessions using SSR markers

21 January 2018

1 reference

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Development of an RFLP map in diploid alfalfa

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23107476

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-13-568

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23107476%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23107476%20AND%20SRC:MED&resulttype=core&format=json

16 February 2020

PubMed publication ID

23107476

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23107476%20AND%20SRC:MED&resulttype=core&format=json