cis-Expression QTL analysis of established colorectal cancer risk variants in colon tumors and adjacent normal tissue (Q35763627)

10 August 2017

title

cis-Expression QTL analysis of established colorectal cancer risk variants in colon tumors and adjacent normal tissue (English)

1 reference

10 August 2017

1 reference

1 reference

Loïc Le Marchand

1 reference

10 August 2017

Steven Gallinger

1 reference

10 August 2017

Daniel J Weisenberger

object named as

Daniel J Weisenberger

1 reference

10 August 2017

James M Church

1 reference

10 August 2017

Lenora W M Loo

1 reference

10 August 2017

Iona Cheng

1 reference

10 August 2017

Maarit Tiirikainen

1 reference

10 August 2017

Annette Lum-Jones

1 reference

10 August 2017

Ann Seifried

1 reference

10 August 2017

Lucas M Dunklee

1 reference

10 August 2017

Robert Gryfe

1 reference

10 August 2017

Robert W Haile

1 reference

10 August 2017

David J Duggan

1 reference

10 August 2017

Stephen N Thibodeau

1 reference

10 August 2017

Graham Casey

1 reference

10 August 2017

language of work or name

English

0 references

publication date

17 February 2012

1 reference

10 August 2017

1 reference

10 August 2017

1 reference

10 August 2017

1 reference

10 August 2017

page(s)

e30477

1 reference

Creative Commons Attribution 4.0 International

10 August 2017

start time

17 February 2012

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

cites work

Principles for the post-GWAS functional characterization of cancer risk loci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Fine-mapping of colorectal cancer susceptibility loci at 8q23.3, 16q22.1 and 19q13.11: refinement of association signals and use of in silico analysis to suggest functional variation and unexpected candidate target genes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

The Control of the Metabolic Switch in Cancers by Oncogenes and Tumor Suppressor Genes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Analysis of the 10q11 cancer risk locus implicates MSMB and NCOA4 in human prostate tumorigenesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

From noncoding variant to phenotype via SORT1 at the 1p13 cholesterol locus

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Induction of the apoptosis inhibitor ARC by Ras in human cancers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Trait-associated SNPs are more likely to be eQTLs: annotation to enhance discovery from GWAS

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

No effect of cancer-associated SNP rs6983267 in the 8q24 region on co-expression of MYC and TCF7L2 in normal colon tissue

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

MACC1, a newly identified key regulator of HGF-MET signaling, predicts colon cancer metastasis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

High-resolution mapping of expression-QTLs yields insight into human gene regulation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Knockdown of RCK/p54 expression by RNAi inhibits proliferation of human colorectal cancer cells in vitro and in vivo

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Caspase-8 and its inhibitors in RCCs in vivo: the prominent role of ARC.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

ARC (apoptosis repressor with caspase recruitment domain) is a novel marker of human colon cancer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Mapping the genetic architecture of gene expression in human liver

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Genetic architecture of transcript-level variation in humans

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Aurora A regulates the activity of HURP by controlling the accessibility of its microtubule-binding domain

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Regulation of p53 tetramerization and nuclear export by ARC

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

A genome-wide association study of global gene expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Gene expression analysis of hematopoietic progenitor cells identifies Dlg7 as a potential stem cell gene

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Relative impact of nucleotide and copy number variation on gene expression phenotypes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

CpG island methylator phenotype underlies sporadic microsatellite instability and is tightly associated with BRAF mutation in colorectal cancer

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

HURP controls spindle dynamics to promote proper interkinetochore tension and efficient kinetochore capture.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

HURP is part of a Ran-dependent complex involved in spindle formation

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Genome-wide associations of gene expression variation in humans

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Phosphorylation and stabilization of HURP by Aurora-A: implication of HURP as a transforming target of Aurora-A

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

An integrative genomics approach to infer causal associations between gene expression and disease

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Genetic analysis of genome-wide variation in human gene expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Genetics of gene expression surveyed in maize, mouse and man

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Identification of a novel cell cycle regulated gene, HURP, overexpressed in human hepatocellular carcinoma

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Characterization of a novel human cell-cycle-regulated homologue of Drosophila dlg1

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Overexpression of rck/p54, a DEAD box protein, in human colorectal tumours

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Identification of a chromosome 18q gene that is altered in colorectal cancers

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

APC mutations occur early during colorectal tumorigenesis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

Selective inhibition of beta-F1-ATPase mRNA translation in human tumours

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3

12 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0030477

Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0030477

Colon Cancer Family Registry: an international resource for studies of the genetic epidemiology of colon cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0030477

Repression of the desmocollin 2 gene expression in human colon cancer cells is relieved by the homeodomain transcription factors Cdx1 and Cdx2.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0030477

The bioenergetic signature of cancer: a marker of tumor progression.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3281844

A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk

25 September 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0030477

A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0030477

Immunohistochemistry versus microsatellite instability testing in phenotyping colorectal tumors

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22363440

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genetics of quantitative variation in human gene expression

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22363440

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Involvement of RNA helicases p68 and p72 in colon cancer

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22363440

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0030477

1 reference

10 August 2017

0 references

1 reference

10 August 2017

1 reference