Fine-mapping of colorectal cancer susceptibility loci at 8q23.3, 16q22.1 and 19q13.11: refinement of association signals and use of in silico analysis to suggest functional variation and unexpected candidate target genes (Q35056061)

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English	Fine-mapping of colorectal cancer susceptibility loci at 8q23.3, 16q22.1 and 19q13.11: refinement of association signals and use of in silico analysis to suggest functional variation and unexpected candidate target genes	scientific article

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scholarly article

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6 August 2017

Fine-mapping of colorectal cancer susceptibility loci at 8q23.3, 16q22.1 and 19q13.11: refinement of association signals and use of in silico analysis to suggest functional variation and unexpected candidate target genes (English)

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6 August 2017

colorectal cancer

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based on heuristic

inferred from title

susceptibility locus

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based on heuristic

inferred from title

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based on heuristic

inferred from title

Richard Houlston

22

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Richard Houlston

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James G. Prendergast

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James Prendergast

10

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Peter Broderick

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Peter Broderick

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Mark A Jenkins

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Malcolm G. Dunlop

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Malcolm Dunlop

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Alan Pittman

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15

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John L Hopper

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6 August 2017

24

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Ian Tomlinson

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6 August 2017

Steven Gallinger

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Steven Gallinger

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Polly A Newcomb

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Polly Newcomb

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6 August 2017

13

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David Conti

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6 August 2017

Jean-Baptiste Cazier

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Jean-Baptiste Cazier

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ORCID Public Data File 2021

7

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Sara Dobbins

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6 August 2017

Susan M Farrington

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Susan Farrington

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6 August 2017

Luis G Carvajal-Carmona

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Luis G Carvajal-Carmona

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6 August 2017

Kimberley M Howarth

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Kimberley Howarth

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David J Duggan

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Harry Campbell

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Evi Theodoratou

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Evi Theodoratou

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6 August 2017

Rebecca A Barnetson

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Rebecca Barnetson

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6 August 2017

author name string

Angela M Jones

3

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Albert Tenesa

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David Kerr

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Graham Casey

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6 August 2017

publication date

29 April 2011

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6 August 2017

Human Molecular Genetics

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6 August 2017

20

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14

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2879-2888

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6 August 2017

Multiple common susceptibility variants near BMP pathway loci GREM1, BMP4, and BMP2 explain part of the missing heritability of colorectal cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Allelic variation at the 8q23.3 colorectal cancer risk locus functions as a cis-acting regulator of EIF3H.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Genetics and beyond--the transcriptome of human monocytes and disease susceptibility

1 reference

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8 July 2018

A method and server for predicting damaging missense mutations

1 reference

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8 July 2018

Understanding mechanisms underlying human gene expression variation with RNA sequencing

1 reference

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8 July 2018

Transcriptome genetics using second generation sequencing in a Caucasian population

1 reference

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8 July 2018

Genome-wide association study of ulcerative colitis identifies three new susceptibility loci, including the HNF4A region

1 reference

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8 July 2018

Common regulatory variation impacts gene expression in a cell type-dependent manner

1 reference

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8 July 2018

A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

1 reference

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8 July 2018

The colorectal cancer risk at 18q21 is caused by a novel variant altering SMAD7 expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

High-resolution mapping of expression-QTLs yields insight into human gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Mapping the genetic architecture of gene expression in human liver

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Common genetic variants at the CRAC1 (HMPS) locus on chromosome 15q13.3 influence colorectal cancer risk

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Population genomics of human gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

A framework for collaborative analysis of ENCODE data: making large-scale analyses biologist-friendly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

The role of the Wnt signalling pathway in colorectal tumorigenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Haploview: analysis and visualization of LD and haplotype maps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

SIFT: Predicting amino acid changes that affect protein function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

Hypermethylation of the promoter region of the E-cadherin gene (CDH1) in sporadic and ulcerative colitis associated colorectal cancer

1 reference

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8 July 2018

A single nucleotide polymorphism in the E-cadherin gene promoter alters transcriptional activities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

8 July 2018

The CDH1-160C>A polymorphism is a risk factor for colorectal cancer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

25 October 2018

The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

25 October 2018

Refinement of the basis and impact of common 11q23.1 variation to the risk of developing colorectal cancer

1 reference

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25 October 2018

A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

25 October 2018

Colon Cancer Family Registry: an international resource for studies of the genetic epidemiology of colon cancer.

1 reference

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SequenceLDhot: detecting recombination hotspots

1 reference

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25 October 2018

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1 reference

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A survey of genetic human cortical gene expression

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9 December 2018

A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

9 December 2018

A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3118761

9 December 2018

Identifiers

10.1093/HMG/DDR190

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Europe PubMed Central

PubMed publication ID

6 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

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