Sumoylation controls the timing of Tup1-mediated transcriptional deactivation. (Q35180097)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25766875%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

title

Sumoylation controls the timing of Tup1-mediated transcriptional deactivation (English)

1 reference

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2 March 2020

1 reference

1 reference

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2 March 2020

1 reference

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2 March 2020

1 reference

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2 March 2020

Akhi Akhter

1 reference

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2 March 2020

Nathan Yurko

series ordinal

1 reference

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2 March 2020

Justin M Burgener

series ordinal

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2 March 2020

language of work or name

English

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publication date

13 March 2015

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2 March 2020

published in

Nature Communications

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2 March 2020

volume

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2 March 2020

page(s)

6610

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The Groucho co-repressor is primarily recruited to local target sites in active chromatin to attenuate transcription

2 March 2020

cites work

1 reference

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Sumoylation: a regulatory protein modification in health and disease

13 July 2018

1 reference

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SUMO: a multifaceted modifier of chromatin structure and function

13 July 2018

1 reference

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Protein group modification and synergy in the SUMO pathway as exemplified in DNA repair

13 July 2018

1 reference

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Chromatin modification by SUMO-1 stimulates the promoters of translation machinery genes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Sumoylation of transcription factor Gcn4 facilitates its Srb10-mediated clearance from promoters in yeast

13 July 2018

1 reference

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The Cyc8-Tup1 complex inhibits transcription primarily by masking the activation domain of the recruiting protein

13 July 2018

1 reference

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Antagonistic Gcn5-Hda1 interactions revealed by mutations to the Anaphase Promoting Complex in yeast

13 July 2018

1 reference

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Phosphoinositide [PI(3,5)P2] lipid-dependent regulation of the general transcriptional regulator Tup1

13 July 2018

1 reference

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Degringolade, a SUMO-targeted ubiquitin ligase, inhibits Hairy/Groucho-mediated repression

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

WD40 Repeat Propellers Define a Ubiquitin-Binding Domain that Regulates Turnover of F Box Proteins

13 July 2018

1 reference

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SUMO functions in constitutive transcription and during activation of inducible genes in yeast.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Activator Gcn4 employs multiple segments of Med15/Gal11, including the KIX domain, to recruit mediator to target genes in vivo

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

SUMO association with repressor complexes, emerging routes for transcriptional control.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

The Tup1 corepressor directs Htz1 deposition at a specific promoter nucleosome marking the GAL1 gene for rapid activation

13 July 2018

1 reference

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A chromatin-mediated mechanism for specification of conditional transcription factor targets

13 July 2018

1 reference

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Transcriptional repression by Tup1-Ssn6.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Histone sumoylation is a negative regulator in Saccharomyces cerevisiae and shows dynamic interplay with positive-acting histone modifications

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Sumoylation of the yeast Gcn5 protein.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Activator Gcn4p and Cyc8p/Tup1p are interdependent for promoter occupancy at ARG1 in vivo

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Something about SUMO inhibits transcription

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Simultaneous recruitment of coactivators by Gcn4p stimulates multiple steps of transcription in vivo

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Global analysis of protein sumoylation in Saccharomyces cerevisiae

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Protein modification by SUMO

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

A multiplicity of coactivators is required by Gcn4p at individual promoters in vivo

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Hog1 kinase converts the Sko1-Cyc8-Tup1 repressor complex into an activator that recruits SAGA and SWI/SNF in response to osmotic stress

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Cti6, a PHD domain protein, bridges the Cyc8-Tup1 corepressor and the SAGA coactivator to overcome repression at GAL1.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Transcriptional repression: the long and the short of it.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Med9/Cse2 and Gal11 modules are required for transcriptional repression of distinct group of genes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Global expression profiling of yeast treated with an inhibitor of amino acid biosynthesis, sulfometuron methyl

13 July 2018

1 reference

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Turning genes off by Ssn6-Tup1: a conserved system of transcriptional repression in eukaryotes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Epitope tagging of yeast genes using a PCR-based strategy: more tags and improved practical routines

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

The Tup1-Cyc8 protein complex can shift from a transcriptional co-repressor to a transcriptional co-activator.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

A complex composed of tup1 and ssn6 represses transcription in vitro

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

The Cyc8 (Ssn6)-Tup1 corepressor complex is composed of one Cyc8 and four Tup1 subunits.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Repression domain of the yeast global repressor Tup1 interacts directly with histones H3 and H4.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Ssn6-Tup1 is a general repressor of transcription in yeast

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

The nuclear pore regulates GAL1 gene transcription by controlling the localization of the SUMO protease Ulp1.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

SUMOylation of the inducible (c-Fos:c-Jun)/AP-1 transcription complex occurs on target promoters to limit transcriptional activation.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Extensive DNA damage-induced sumoylation contributes to replication and repair and acts in addition to the mec1 checkpoint

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Covalent conjugation of Groucho with SUMO-1 modulates its corepressor activity

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

A two-step method for the introduction of single or multiple defined point mutations into the genome of Saccharomyces cerevisiae.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Identification of sumoylated proteins by systematic immunoprecipitation of the budding yeast proteome

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Global analyses of sumoylated proteins in Saccharomyces cerevisiae. Induction of protein sumoylation by cellular stresses

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

The SUMO isopeptidase Ulp2 prevents accumulation of SUMO chains in yeast

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Chemically regulated transcription factors reveal the persistence of repressor-resistant transcription after disrupting activator function.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4360881

Systematic study of protein sumoylation: Development of a site-specific predictor of SUMOsp 2.0

27 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS7610

A Proteomic Strategy for Gaining Insights into Protein Sumoylation in Yeast

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNCOMMS7610

Functional dissection of the yeast Cyc8–Tupl transcriptional co-repressor complex

21 January 2018

1 reference

Crossref

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Proteasome inhibition in wild-type yeast Saccharomyces cerevisiae cells

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25766875

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12 December 2020

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Site-directed, Ligase-Independent Mutagenesis (SLIM) for highly efficient mutagenesis of plasmids greater than 8kb

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PubMed

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inferred from PubMed ID database lookup

12 December 2020

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Identifiers

DOI

10.1038/NCOMMS7610

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25766875%20AND%20SRC:MED&resulttype=core&format=json

2 March 2020

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mapped directly with Wikidata item

24 November 2022

based on heuristic

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2 March 2020

PubMed publication ID

25766875

1 reference

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