WD40 Repeat Propellers Define a Ubiquitin-Binding Domain that Regulates Turnover of F Box Proteins (Q27665843)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

title

WD40 repeat propellers define a ubiquitin-binding domain that regulates turnover of F box proteins (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

Ubiquitin-binding TORC1 subunit KOG1 YHR186C

16 January 2020

main subject

cell biology

0 references

1 reference

Bub3p YOR026W

1 reference

Arc40p YBR234C

1 reference

Ubiquitin-binding SDF ubiquitin ligase complex subunit MET30 YIL046W

1 reference

Coatomer subunit beta' YGL137W

1 reference

Coatomer subunit alpha YDL145C

1 reference

Phosphoinositide binding protein ATG18 YFR021W

1 reference

Chromatin modification protein YBR198C

1 reference

Mdv1p YJL112W

1 reference

SCF ubiquitin ligase complex subunit CDC4 YFL009W

1 reference

Ubiquitin-binding serine/threonine protein kinase VPS15 YBR097W

1 reference

Doa1p YKL213C

1 reference

Duf1p YOL087C

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

author name string

Stanley C Winistorfer

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

S Ramaswamy

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

publication date

1 November 2010

1 reference

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16 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

volume

1 reference

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16 January 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

page(s)

433-443

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

VHS domains of ESCRT-0 cooperate in high-avidity binding to polyubiquitinated cargo

16 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Conformational Dynamics and Structural Plasticity Play Critical Roles in the Ubiquitin Recognition of a UIM Domain

20 March 2017

1 reference

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Structure and Function of the PLAA/Ufd3-p97/Cdc48 Complex

20 March 2017

1 reference

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Structural Basis for Ubiquitin Recognition by a Novel Domain from Human Phospholipase A2-activating Protein

20 March 2017

1 reference

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Identification of a novel ubiquitin binding site of STAM1 VHS domain by NMR spectroscopy

20 March 2017

1 reference

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UAF1 is a subunit of multiple deubiquitinating enzyme complexes

20 March 2017

1 reference

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Structural insights into NEDD8 activation of cullin-RING ligases: conformational control of conjugation

20 March 2017

1 reference

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Interactions between the three CIN85 SH3 domains and ubiquitin: implications for CIN85 ubiquitination

20 March 2017

1 reference

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Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction

20 March 2017

1 reference

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Affinity Makes the Difference: Nonselective Interaction of the UBA Domain of Ubiquilin-1 with Monomeric Ubiquitin and Polyubiquitin Chains

20 March 2017

1 reference

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Suprafacial orientation of the SCFCdc4 dimer accommodates multiple geometries for substrate ubiquitination

20 March 2017

1 reference

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Structure of a Fbw7-Skp1-cyclin E complex: multisite-phosphorylated substrate recognition by SCF ubiquitin ligases

20 March 2017

1 reference

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Solution structure of Vps27 UIM-ubiquitin complex important for endosomal sorting and receptor downregulation

20 March 2017

1 reference

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Structural basis for phosphodependent substrate selection and orientation by the SCFCdc4 ubiquitin ligase

20 March 2017

1 reference

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Structural studies of the interaction between ubiquitin family proteins and proteasome subunit S5a

20 March 2017

1 reference

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A family of mammalian F-box proteins

20 March 2017

1 reference

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Features and development of Coot

20 March 2017

1 reference

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Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7

20 March 2017

1 reference

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PHENIX: building new software for automated crystallographic structure determination

20 March 2017

1 reference

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Maximum-likelihood density modification

20 March 2017

1 reference

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Automated MAD and MIR structure solution

20 March 2017

1 reference

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DOA1/UFD3 plays a role in sorting ubiquitinated membrane proteins into multivesicular bodies

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Ubiquitin binds to and regulates a subset of SH3 domains

20 March 2017

1 reference

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Doa1 is a Cdc48 adapter that possesses a novel ubiquitin binding domain

20 March 2017

1 reference

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Functional division of substrate processing cofactors of the ubiquitin-selective Cdc48 chaperone

20 March 2017

1 reference

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Mechanism of the eukaryotic chaperonin: protein folding in the chamber of secrets.

20 March 2017

1 reference

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Function and regulation of cullin-RING ubiquitin ligases

20 March 2017

1 reference

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WD-repeat proteins: structure characteristics, biological function, and their involvement in human diseases

20 March 2017

1 reference

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The ancient regulatory-protein family of WD-repeat proteins

20 March 2017

1 reference

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Eap45 in mammalian ESCRT-II binds ubiquitin via a phosphoinositide-interacting GLUE domain

20 March 2017

1 reference

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SCF and Cullin/Ring H2-based ubiquitin ligases

20 March 2017

1 reference

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Ubiquitin-binding domains - from structures to functions

7 April 2017

1 reference

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A role for ubiquitin in selective autophagy

7 April 2017

1 reference

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The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins

7 April 2017

1 reference

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Nonproteolytic functions of ubiquitin in cell signaling

7 April 2017

1 reference

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Histone ubiquitination: triggering gene activity

7 April 2017

1 reference

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HADDOCK versus HADDOCK: new features and performance of HADDOCK2.0 on the CAPRI targets

7 April 2017

1 reference

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The machines that divide and fuse mitochondria

7 April 2017

1 reference

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Ubiquitin-binding domains

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Rapid and reliable protein extraction from yeast

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

CRL4s: the CUL4-RING E3 ubiquitin ligases

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

The COPI system: molecular mechanisms and function

29 September 2017

1 reference

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Recent advances in understanding the structure and function of general transcription factor TFIID.

29 September 2017

1 reference

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Ubiquitin receptors and ERAD: a network of pathways to the proteasome

29 September 2017

1 reference

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DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Structural complexity in ubiquitin recognition.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Identification of a novel 29-linked polyubiquitin binding protein, Ufd3, using polyubiquitin chain analogues

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Lub1 participates in ubiquitin homeostasis and stress response via maintenance of cellular ubiquitin contents in fission yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Stability of homologue of Slimb F-box protein is regulated by availability of its substrate

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

A molecular basis for stabilization of the von Hippel-Lindau (VHL) tumor suppressor protein by components of the VHL ubiquitin ligase

29 September 2017

1 reference

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Mapping protein-protein interactions in solution by NMR spectroscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

A ubiquitin-interacting motif conserved in components of the proteasomal and lysosomal protein degradation systems

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

ConSurf: an algorithmic tool for the identification of functional regions in proteins by surface mapping of phylogenetic information

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

The F-box protein Skp2 is a ubiquitylation target of a Cul1-based core ubiquitin ligase complex: evidence for a role of Cul1 in the suppression of Skp2 expression in quiescent fibroblasts

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Ubiquitin-dependent degradation of multiple F-box proteins by an autocatalytic mechanism

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

The abundance of cell cycle regulatory protein Cdc4p is controlled by interactions between its F box and Skp1p

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Cdc48p interacts with Ufd3p, a WD repeat protein required for ubiquitin-mediated proteolysis in Saccharomyces cerevisiae.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Cdc48p(Npl4p/Ufd1p) binds and segregates membrane-anchored/tethered complexes via a polyubiquitin signal present on the anchors

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Role of Doa1 in the Saccharomyces cerevisiae DNA damage response

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Unique role for the UbL-UbA protein Ddi1 in turnover of SCFUfo1 complexes

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

WDR5, a complexed protein.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

E3-independent monoubiquitination of ubiquitin-binding proteins.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

ZDOCK: an initial-stage protein-docking algorithm.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3266742

Ubiquitination without E3

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21070969

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Ubiquitination and degradation of the substrate recognition subunits of SCF ubiquitin-protein ligases

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21070969

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.MOLCEL.2010.10.018

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

release_esjbwyo4r5hrbhfxl7rwvenpce

16 January 2020

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/esjbwyo4r5hrbhfxl7rwvenpce

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json

16 January 2020

PubMed publication ID

21070969

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21070969%20AND%20SRC:MED&resulttype=core&format=json