Genome-wide analysis of cell type-specific gene transcription during spore formation in Clostridium difficile. (Q35008836)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

title

Genome-wide analysis of cell type-specific gene transcription during spore formation in Clostridium difficile (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

main subject

Clostridium difficile

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

Laure Saujet

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

Pavel V Shelyakin

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

Bruno Dupuy

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

Isabelle Martin-Verstraete

series ordinal

1 reference

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27 February 2020

publication date

3 October 2013

1 reference

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27 February 2020

1 reference

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27 February 2020

volume

1 reference

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27 February 2020

issue

1 reference

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27 February 2020

page(s)

e1003756

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

27 February 2020

start time

3 October 2013

1 reference

April 2022 Public Data File from Crossref

copyrighted

0 references

describes a project that uses

limma

object named as

limma

2 references

22 June 2022

https://europepmc.org/article/PMC/3789822

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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The transcriptional program underlying the physiology of clostridial sporulation

8 July 2018

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Roles of DacB and spm proteins in clostridium perfringens spore resistance to moist heat, chemicals, and UV radiation

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Essential internal promoter in the spoIIIA locus of Bacillus subtilis

8 July 2018

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8 July 2018

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A comparative genomic view of clostridial sporulation and physiology

8 July 2018

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8 July 2018

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8 July 2018

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The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis

8 July 2018

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Compartmentalization of gene expression during Bacillus subtilis spore formation

8 July 2018

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The IspA protease's involvement in the regulation of the sporulation process of Bacillus thuringiensis is revealed by proteomic analysis

8 July 2018

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Production of muramic delta-lactam in Bacillus subtilis spore peptidoglycan.

8 July 2018

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The Spo0A regulon of Bacillus subtilis

8 July 2018

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Normalization of cDNA microarray data

8 July 2018

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Northern, morphological, and fermentation analysis of spo0A inactivation and overexpression in Clostridium acetobutylicum ATCC 824.

8 July 2018

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

8 July 2018

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The products of the spoVA operon are involved in dipicolinic acid uptake into developing spores of Bacillus subtilis

8 July 2018

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Bacillus subtilis locus encoding a killer protein and its antidote.

8 July 2018

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The transcriptional profile of early to middle sporulation in Bacillus subtilis.

8 July 2018

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Characterization of a new sigma-K-dependent peptidoglycan hydrolase gene that plays a role in Bacillus subtilis mother cell lysis.

8 July 2018

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A Bacillus subtilis secreted protein with a role in endospore coat assembly and function.

8 July 2018

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Identification and Characterization of Sporulation-Dependent Promoters Upstream of the Enterotoxin Gene ( cpe ) of Clostridium perfringens

8 July 2018

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Molecular genetics of sporulation in Bacillus subtilis.

8 July 2018

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A compartmentalized regulator of developmental gene expression in Bacillus subtilis

8 July 2018

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Analysis of the role of prespore gene expression in the compartmentalization of mother cell-specific gene expression during sporulation of Bacillus subtilis

8 July 2018

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Bacillus subtilis sporulation: regulation of gene expression and control of morphogenesis.

8 July 2018

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Multilevel regulation of the sporulation transcription factor sigma K in Bacillus subtilis

8 July 2018

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Identification of a gene, spoIIR, that links the activation of sigma E to the transcriptional activity of sigma F during sporulation in Bacillus subtilis

8 July 2018

1 reference

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Cell-cell signaling pathway activating a developmental transcription factor in Bacillus subtilis

8 July 2018

1 reference

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Cloning and characterization of a Bacillus thuringiensis homolog of the spoIIID gene from Bacillus subtilis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3789822

Use of sodium taurocholate to enhance spore recovery on a medium selective for Clostridium difficile.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3789822

Influence of spo mutations on sigma E synthesis in Bacillus subtilis

8 July 2018

1 reference

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The Bacillus subtilis gene for the development transcription factor sigma K is generated by excision of a dispensable DNA element containing a sporulation recombinase gene.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3789822

A forespore checkpoint for mother cell gene expression during development in B. subtilis.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3789822

The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.

8 July 2018

1 reference

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Identification of sporulation genes by genome-wide analysis of the sigmaE regulon of Bacillus subtilis.

21 January 2018

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Efficient sporulation in Clostridium difficile requires disruption of the σK gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003756

A novel pathway of intercellular signalling in Bacillus subtilis involves a protein with similarity to a component of type III secretion channels

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003756

Non-uniform assembly of the Bacillus anthracis exosporium and a bottle cap model for spore germination and outgrowth

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003756

SleC is essential for germination of Clostridium difficile spores in nutrient-rich medium supplemented with the bile salt taurocholate

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003756

Genetic dissection of an inhibitor of the sporulation sigma factor sigma(G).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003756

Developmental commitment in a bacterium

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003756

SpoIVB has two distinct functions during spore formation in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003756

A modular system for Clostridium shuttle plasmids

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003756

Generation of an erythromycin-sensitive derivative of Clostridium difficile strain 630 (630Deltaerm) and demonstration that the conjugative transposon Tn916DeltaE enters the genome of this strain at multiple sites

21 January 2018

1 reference

12 December 2020

Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis

1 reference

12 December 2020

The forespore line of gene expression in Bacillus subtilis

1 reference

12 December 2020

The ClosTron: a universal gene knock-out system for the genus Clostridium

1 reference

12 December 2020

A three-protein inhibitor of polar septation during sporulation in Bacillus subtilis

1 reference

12 December 2020

Sequence-specific interactions between promoter DNA and the RNA polymerase sigma factor E

1 reference

12 December 2020

Clostridial spore germination versus bacilli: Genome mining and current insights

1 reference

12 December 2020

[Software for analyzing bacterial genomes]

1 reference

12 December 2020

Sporulation and time course expression of sigma-factor homologous genes in Clostridium acetobutylicum

1 reference

12 December 2020

10.1371/JOURNAL.PGEN.1003756

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json

27 February 2020

PubMed publication ID

24098137

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24098137%20AND%20SRC:MED&resulttype=core&format=json