Hierarchical Evolution of the Bacterial Sporulation Network (Q34149232)

31 July 2017

title

Hierarchical evolution of the bacterial sporulation network (English)

1 reference

31 July 2017

Hierarchical Evolution of the Bacterial Sporulation Network (English)

1 reference

Crossref

https://api.crossref.org/works/10.1016/J.CUB.2010.06.031

11 July 2024

Michiel J. L. de Hoon

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20833318

11 July 2024

Patrick Eichenberger

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20833318

11 July 2024

Dennis Vitkup

1 reference

31 July 2017

language of work or name

English

0 references

publication date

1 September 2010

1 reference

31 July 2017

14 September 2010

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=20833318

full work available at URL

11 July 2024

http://www.cell.com/article/S0960982210007773/pdf

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20833318

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20833318/?tool=EBI

11 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20833318

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20833318/pdf/?tool=EBI

11 July 2024

file format

Portable Document Format

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20833318

https://europepmc.org/articles/PMC2944226

11 July 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20833318

https://europepmc.org/articles/PMC2944226?pdf=render

11 July 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20833318

https://doi.org/10.1016/j.cub.2010.06.031

11 July 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20833318

https://api.elsevier.com/content/article/PII:S0960982210007773?httpAccept=text/xml

11 July 2024

1 reference

Crossref

https://api.crossref.org/works/10.1016/J.CUB.2010.06.031

https://api.elsevier.com/content/article/PII:S0960982210007773?httpAccept=text/plain

11 July 2024

1 reference

Crossref

https://api.crossref.org/works/10.1016/J.CUB.2010.06.031

11 July 2024

1 reference

31 July 2017

1 reference

31 July 2017

1 reference

31 July 2017

page(s)

R735-45

1 reference

A distance-weighted interaction map reveals a previously uncharacterized layer of the Bacillus subtilis spore coat

31 July 2017

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28 July 2018

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28 July 2018

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28 July 2018

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28 July 2018

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A feeding tube model for activation of a cell-specific transcription factor during sporulation in Bacillus subtilis

28 July 2018

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Sporulation and enterotoxin (CPE) synthesis are controlled by the sporulation-specific sigma factors SigE and SigK in Clostridium perfringens

28 July 2018

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The evolution of hierarchical gene regulatory networks

28 July 2018

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Properties of developmental gene regulatory networks

28 July 2018

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28 July 2018

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Transcriptome divergence and the loss of plasticity in Bacillus subtilis after 6,000 generations of evolution under relaxed selection for sporulation

28 July 2018

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A channel connecting the mother cell and forespore during bacterial endospore formation.

28 July 2018

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The transcriptional program underlying the physiology of clostridial sporulation

28 July 2018

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Role of spore coat proteins in the resistance of Bacillus subtilis spores to Caenorhabditis elegans predation

28 July 2018

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The genome of Bacillus coahuilensis reveals adaptations essential for survival in the relic of an ancient marine environment

28 July 2018

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Sequence-directed DNA export guides chromosome translocation during sporulation in Bacillus subtilis.

28 July 2018

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Evidence that the Bacillus subtilis SpoIIGA protein is a novel type of signal-transducing aspartic protease

28 July 2018

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Structure, assembly, and function of the spore surface layers.

28 July 2018

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GenoList: an integrated environment for comparative analysis of microbial genomes

28 July 2018

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DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information

28 July 2018

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Divergence of transcription factor binding sites across related yeast species

28 July 2018

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Emerging principles of regulatory evolution

28 July 2018

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An excitable gene regulatory circuit induces transient cellular differentiation

28 July 2018

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Gene regulatory networks and the evolution of animal body plans

28 July 2018

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The Bacillus subtilis spore coat provides "eat resistance" during phagocytic predation by the protozoan Tetrahymena thermophila

28 July 2018

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Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901

28 July 2018

1 reference

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Evidence that entry into sporulation in Bacillus subtilis is governed by a gradual increase in the level and activity of the master regulator Spo0A.

28 July 2018

1 reference

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Prediction of transcriptional terminators in Bacillus subtilis and related species

28 July 2018

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Genomics of the Bacillus cereus group of organisms

28 July 2018

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High- and low-threshold genes in the Spo0A regulon of Bacillus subtilis

28 July 2018

1 reference

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Zipper-like interaction between proteins in adjacent daughter cells mediates protein localization

28 July 2018

1 reference

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The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis

28 July 2018

1 reference

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Regulation of endospore formation in Bacillus subtilis

28 July 2018

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The Spo0A regulon of Bacillus subtilis

28 July 2018

1 reference

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Evolution of signalling in the sporulation phosphorelay

28 July 2018

1 reference

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Specialized peptidoglycan of the bacterial endospore: the inner wall of the lockbox

28 July 2018

1 reference

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Crystal structure of the Bacillus stearothermophilus anti-sigma factor SpoIIAB with the sporulation sigma factor sigmaF

28 July 2018

1 reference

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Development of a two-part transcription probe to determine the completeness of temporal and spatial compartmentalization of gene expression during bacterial development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

A family of membrane-embedded metalloproteases involved in regulated proteolysis of membrane-associated transcription factors

28 July 2018

1 reference

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A vital stain for studying membrane dynamics in bacteria: a novel mechanism controlling septation during Bacillus subtilis sporulation

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

28 July 2018

1 reference

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The complete genome sequence of the gram-positive bacterium Bacillus subtilis

28 July 2018

1 reference

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SpoIIAB is an anti-sigma factor that binds to and inhibits transcription by regulatory protein sigma F from Bacillus subtilis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Identification of a gene, spoIIR, that links the activation of sigma E to the transcriptional activity of sigma F during sporulation in Bacillus subtilis

28 July 2018

1 reference

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Cell-cell signaling pathway activating a developmental transcription factor in Bacillus subtilis

28 July 2018

1 reference

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SubtiList: a relational database for the Bacillus subtilis genome

28 July 2018

1 reference

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Processing of a sporulation sigma factor in Bacillus subtilis: how morphological structure could control gene expression.

28 July 2018

1 reference

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Sporulation-specific sigma factor sigma 29 of Bacillus subtilis is synthesized from a precursor protein, P31.

28 July 2018

1 reference

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New RNA polymerase sigma factor under spo0 control in Bacillus subtilis

28 July 2018

1 reference

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Switch protein alters specificity of RNA polymerase containing a compartment-specific sigma factor

28 July 2018

1 reference

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Basic local alignment search tool

28 July 2018

1 reference

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Processing of the mother-cell sigma factor, sigma K, may depend on events occurring in the forespore during Bacillus subtilis development

28 July 2018

1 reference

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A forespore checkpoint for mother cell gene expression during development in B. subtilis.

28 July 2018

1 reference

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Forespore-specific transcription of a gene in the signal transduction pathway that governs Pro-sigma K processing in Bacillus subtilis.

28 July 2018

1 reference

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Initiation of sporulation in B. subtilis is controlled by a multicomponent phosphorelay

28 July 2018

1 reference

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Characterization of bofA, a gene involved in intercompartmental regulation of pro-sigma K processing during sporulation in Bacillus subtilis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Crisscross regulation of cell-type-specific gene expression during development in B. subtilis

28 July 2018

1 reference

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Genetic aspects of bacterial endospore formation

28 July 2018

1 reference

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Evolutionary innovation and stability in animal gene networks

28 July 2018

1 reference

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Intramembrane proteolytic cleavage of a membrane-tethered transcription factor by a metalloprotease depends on ATP.

28 October 2018

1 reference

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A mechanism for cell cycle regulation of sporulation initiation in Bacillus subtilis

28 October 2018

1 reference

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Novel secretion apparatus maintains spore integrity and developmental gene expression in Bacillus subtilis.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

A novel pathway of intercellular signalling in Bacillus subtilis involves a protein with similarity to a component of type III secretion channels

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Control of cell fate by the formation of an architecturally complex bacterial community

28 October 2018

1 reference

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The ATPase SpoIIIE transports DNA across fused septal membranes during sporulation in Bacillus subtilis

28 October 2018

1 reference

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The Bacillus and Myxococcus developmental networks and their transcriptional regulators

28 October 2018

1 reference

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Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures

28 October 2018

1 reference

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The evolution of genetic networks by non-adaptive processes.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Single cell analysis of gene expression patterns of competence development and initiation of sporulation in Bacillus subtilis grown on chemically defined media.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Signalling network with a bistable hysteretic switch controls developmental activation of the sigma transcription factor in Bacillus subtilis.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

A comparative genomic view of clostridial sporulation and physiology

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

The ylbO gene product of Bacillus subtilis is involved in the coat development and lysozyme resistance of spore.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Topological generalizations of network motifs.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Cannibalism by sporulating bacteria

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Efficient sporulation in Clostridium difficile requires disruption of the σK gene

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Resistance of Bacillus endospores to extreme terrestrial and extraterrestrial environments

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Activation of cell-specific transcription by a serine phosphatase at the site of asymmetric division

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2944226

Cytologic classification, by their blockage stage, of sporulation mutants of Bacillus subtilis Marburg

28 October 2018

1 reference

12 December 2020

Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis

1 reference

12 December 2020

Bacillus subtilis spoIIIE protein required for DNA segregation during asymmetric cell division

1 reference

12 December 2020

Localization of protein implicated in establishment of cell type to sites of asymmetric division

1 reference

12 December 2020

σF, the first compartment-specific transcription factor of B. subtilis, is regulated by an anti-σ factor that is also a protein kinase

1 reference

12 December 2020

1 reference

12 December 2020

The forespore line of gene expression in Bacillus subtilis

1 reference

12 December 2020

Chromosome arrangement within a bacterium

1 reference

12 December 2020

Identifiers

1 reference

31 July 2017

1 reference

31 July 2017

1 reference