Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations (Q34677480)

3 August 2017

title

Mobile element scanning (ME-Scan) identifies thousands of novel Alu insertions in diverse human populations (English)

1 reference

3 August 2017

Mark A Batzer

1 reference

3 August 2017

Lynn B Jorde

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3 August 2017

David J Witherspoon

1 reference

3 August 2017

Yuhua Zhang

1 reference

3 August 2017

Jinchuan Xing

1 reference

3 August 2017

W Scott Watkins

1 reference

3 August 2017

Hongseok Ha

1 reference

3 August 2017

publication date

18 April 2013

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3 August 2017

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3 August 2017

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3 August 2017

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3 August 2017

page(s)

1170-1181

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Genomes of replicatively senescent cells undergo global epigenetic changes leading to gene silencing and activation of transposable elements

3 August 2017

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Demographic history and rare allele sharing among human populations

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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LTR retroelements in the genome of Daphnia pulex

7 July 2018

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7 July 2018

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Mobile interspersed repeats are major structural variants in the human genome

7 July 2018

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7 July 2018

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High-throughput sequencing reveals extensive variation in human-specific L1 content in individual human genomes

7 July 2018

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7 July 2018

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The impact of retrotransposons on human genome evolution

7 July 2018

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L1 retrotransposition in human neural progenitor cells

7 July 2018

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7 July 2018

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7 July 2018

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Fine-scaled human genetic structure revealed by SNP microarrays

7 July 2018

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Demography and weak selection drive patterns of transposable element diversity in natural populations of Arabidopsis lyrata

7 July 2018

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Worldwide human relationships inferred from genome-wide patterns of variation

7 July 2018

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The diploid genome sequence of an individual human

7 July 2018

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HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modifications

7 July 2018

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In search of polymorphic Alu insertions with restricted geographic distributions

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Transcription start regions in the human genome are favored targets for MLV integration

7 July 2018

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Genetic variation among world populations: inferences from 100 Alu insertion polymorphisms

7 July 2018

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ATLAS: a system to selectively identify human-specific L1 insertions.

7 July 2018

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An active DNA transposon family in rice

7 July 2018

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Retroelement distributions in the human genome: variations associated with age and proximity to genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

HIV-1 integration in the human genome favors active genes and local hotspots

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

A technique for genome-wide identification of differences in the interspersed repeats integrations between closely related genomes and its application to detection of human-specific integrations of HERV-K LTRs.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Genomic characterization of recent human LINE-1 insertions: evidence supporting random insertion

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Initial sequencing and analysis of the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Reading between the LINEs: human genomic variation induced by LINE-1 retrotransposition

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Recently integrated human Alu repeats: finding needles in the haystack

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Sequence patterns indicate an enzymatic involvement in integration of mammalian retroposons

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Origins and affinities of modern humans: a comparison of mitochondrial and nuclear genetic data

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Basic local alignment search tool

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

DNA transposon dynamics in populations of Daphnia pulex with and without sex.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Transposon Display identifies individual transposable elements in high copy number lines

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Human population genetic structure and diversity inferred from polymorphic L1(LINE-1) and Alu insertions

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3698510

Female gene flow stratifies Hindu castes

26 October 2018

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Unexpected consequences of a sudden and massive transposon amplification on rice gene expression

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23599355

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DcMaster transposon display markers as a tool for diversity evaluation of carrot breeding materials and for hybrid seed purity testing

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23599355

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Comprehensive Sequence Analyses of 5' Flanking Regions of Primate Alu Elements

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23599355

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.148973.112

1 reference

3 August 2017

1 reference

3 August 2017

1 reference