Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis (Q34185155)

31 July 2017

title

Transcriptome survey reveals increased complexity of the alternative splicing landscape in Arabidopsis (English)

1 reference

alternative mRNA splicing, via spliceosome

31 July 2017

0 references

1 reference

Yamile Marquez

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Maria Kalyna

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Andrea Barta

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John W S Brown

1 reference

31 July 2017

Craig Simpson

series ordinal

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31 July 2017

publication date

5 March 2012

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31 July 2017

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31 July 2017

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31 July 2017

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31 July 2017

page(s)

1184-1195

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Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis.

31 July 2017

cites work

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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An unappreciated role for RNA surveillance

5 July 2018

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5 July 2018

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Impact of alternative initiation, splicing, and termination on the diversity of the mRNA transcripts encoded by the mouse transcriptome

5 July 2018

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Alternative splicing modulation by a LAMMER kinase impinges on developmental and transcriptome expression

5 July 2018

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5 July 2018

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5 July 2018

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Alternative splicing and genome complexity

5 July 2018

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5 July 2018

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5 July 2018

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The ethylene-inducible PK12 kinase mediates the phosphorylation of SR splicing factors

5 July 2018

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Frequent alternative splicing of human genes

5 July 2018

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Both phosphorylation and dephosphorylation of ASF/SF2 are required for pre-mRNA splicing in vitro

5 July 2018

1 reference

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In Vivo Regulation of Alternative Pre-mRNA Splicing by the Clk1 Protein Kinase

5 July 2018

1 reference

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SRPK1 and Clk/Sty protein kinases show distinct substrate specificities for serine/arginine-rich splicing factors

5 July 2018

1 reference

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The Clk/Sty protein kinase phosphorylates SR splicing factors and regulates their intranuclear distribution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

Alternative splicing of STY, a nuclear dual specificity kinase.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

Altered expression of the calcitonin gene associated with RNA polymorphism.

5 July 2018

1 reference

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The minimum functional length of pre-mRNA introns in monocots and dicots.

5 July 2018

1 reference

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An amazing sequence arrangement at the 5' ends of adenovirus 2 messenger RNA.

5 July 2018

1 reference

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Spliced segments at the 5′ terminus of adenovirus 2 late mRNA

5 July 2018

1 reference

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Alternative promoter usage generates multiple evolutionarily conserved isoforms of Drosophila DOA kinase

5 July 2018

1 reference

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Genome-wide analysis of transcript isoform variation in humans

28 October 2018

1 reference

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Sampling the Arabidopsis transcriptome with massively parallel pyrosequencing

28 October 2018

1 reference

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Whole-genome microarray in Arabidopsis facilitates global analysis of retained introns.

28 October 2018

1 reference

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Analysis of the cDNAs of hypothetical genes on Arabidopsis chromosome 2 reveals numerous transcript variants.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

Detection and evaluation of intron retention events in the human transcriptome.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

Refined annotation of the Arabidopsis genome by complete expressed sequence tag mapping

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

An alternative-exon database and its statistical analysis

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

An SC35-like protein and a novel serine/arginine-rich protein interact with Arabidopsis U1-70K protein

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

The AU-rich sequences present in the introns of plant nuclear pre-mRNAs are required for splicing.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

Changes in Alternative Splicing of Human and Mouse Genes Are Accompanied by Faster Evolution of Constitutive Exons

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3371709

Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22391557

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.134106.111

1 reference

31 July 2017

1 reference

31 July 2017

1 reference