Whole-genome resequencing allows detection of many rare LINE-1 insertion alleles in humans (Q28744043)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980553%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

title

Whole-genome resequencing allows detection of many rare LINE-1 insertion alleles in humans (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980553%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

main subject

whole genome sequencing

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980553%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Haig H Kazazian

1 reference

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14 January 2020

language of work or name

English

0 references

publication date

27 October 2010

1 reference

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14 January 2020

1 reference

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14 January 2020

volume

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14 January 2020

issue

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14 January 2020

page(s)

985-990

1 reference

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A map of human genome variation from population-scale sequencing

14 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

LINE-1 retrotransposition activity in human genomes

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

High-throughput sequencing reveals extensive variation in human-specific L1 content in individual human genomes

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Complete Khoisan and Bantu genomes from southern Africa

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

The impact of retrotransposons on human genome evolution

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

The first Korean genome sequence and analysis: full genome sequencing for a socio-ethnic group

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

dbRIP: a highly integrated database of retrotransposon insertion polymorphisms in humans

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Hot L1s account for the bulk of retrotransposition in the human population

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Genetic analysis of African populations: human evolution and complex disease

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Initial sequencing and analysis of the human genome

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Mobile elements: drivers of genome evolution

16 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Genotype, haplotype and copy-number variation in worldwide human populations

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Natural mutagenesis of human genomes by endogenous retrotransposons

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Mobile interspersed repeats are major structural variants in the human genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Mobile element scanning (ME-Scan) by targeted high-throughput sequencing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Genome-wide mapping and assembly of structural variant breakpoints in the mouse genome

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Whole-genome sequencing in a patient with Charcot-Marie-Tooth neuropathy

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Mobile elements create structural variation: analysis of a complete human genome.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Extensive variation between inbred mouse strains due to endogenous L1 retrotransposition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Proportionally more deleterious genetic variation in European than in African populations.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Mammalian non-LTR retrotransposons: for better or worse, in sickness and in health

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Identification and characterization of novel polymorphic LINE-1 insertions through comparison of two human genome sequence assemblies

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Extensive individual variation in L1 retrotransposition capability contributes to human genetic diversity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Natural genetic variation caused by transposable elements in humans

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Following the LINEs: an analysis of primate genomic variation at human-specific LINE-1 insertion sites

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

ATLAS: a system to selectively identify human-specific L1 insertions.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

A comprehensive analysis of recently integrated human Ta L1 elements

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Twin priming: a proposed mechanism for the creation of inversions in L1 retrotransposition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Many human L1 elements are capable of retrotransposition

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Unit-length line-1 transcripts in human teratocarcinoma cells

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

Human population genetic structure and diversity inferred from polymorphic L1(LINE-1) and Alu insertions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3106331

27 November 2018

Identifiers

DOI

10.1101/GR.114777.110

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980553%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980553%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

PubMed publication ID

20980553

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20980553%20AND%20SRC:MED&resulttype=core&format=json