The hammerhead cleavage reaction in monovalent cations (Q28364696)

6 July 2017

title

The hammerhead cleavage reaction in monovalent cations (English)

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6 July 2017

Curtis EA

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6 July 2017

Bartel DP

series ordinal

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6 July 2017

language of work or name

English

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publication date

1 April 2001

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6 July 2017

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6 July 2017

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6 July 2017

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6 July 2017

page(s)

546-552

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The structural basis of ribosome activity in peptide bond synthesis

6 July 2017

cites work

1 reference

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The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

20 March 2017

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Capture and visualization of a catalytic RNA enzyme-product complex using crystal lattice trapping and X-ray holographic reconstruction

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

The hammerhead, hairpin and VS ribozymes are catalytically proficient in monovalent cations alone

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Crystal structure of a hepatitis delta virus ribozyme

20 March 2017

1 reference

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Inhibition of the Hammerhead Ribozyme Cleavage Reaction by Site-Specific Binding of Tb(III)

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Self-cleavage of plus and minus RNAs of a virusoid and a structural model for the active sites

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Mg2+-independent hairpin ribozyme catalysis in hydrated RNA films.

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Thiophilic metal ion rescue of phosphorothioate interference within the Tetrahymena ribozyme P4-P6 domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Relationship between internucleotide linkage geometry and the stability of RNA.

29 September 2017

1 reference

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A re-investigation of the thio effect at the hammerhead cleavage site

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Metal Ions Play a Passive Role in the Hairpin Ribozyme Catalysed Reaction

29 September 2017

1 reference

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Structure and function of the hammerhead ribozyme: an unfinished story

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

General acid-base catalysis in the mechanism of a hepatitis delta virus ribozyme

29 September 2017

1 reference

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Identification of the hammerhead ribozyme metal ion binding site responsible for rescue of the deleterious effect of a cleavage site phosphorothioate

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Unusual metal ion catalysis in an acyl-transferase ribozyme

2 June 2018

1 reference

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Self‐Cleaving Ribozymes of Hepatitis Delta Virus RNA

2 June 2018

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Mechanistic aspects of enzymatic catalysis: lessons from comparison of RNA and protein enzymes

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Analytical study of rat retrotransposon VL30 RNA dimerization in vitro and packaging in murine leukemia virus

2 June 2018

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RNAs with dual specificity and dual RNAs with similar specificity

2 June 2018

1 reference

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Role of divalent metal ions in the hammerhead RNA cleavage reaction

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Imidazole rescue of a cytosine mutation in a self-cleaving ribozyme

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Hammerhead ribozyme kinetics

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370108

Patterns of cleavages induced by lead ions in defined RNA secondary structure motifs.

27 November 2018

1 reference

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Involvement of a specific metal ion in the transition of the hammerhead ribozyme to its catalytic conformation.

27 November 2018

1 reference

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Interactions of some naturally occurring cations with phenylalanine and initiator tRNA from yeast as reflected by their thermal stability

27 November 2018

1 reference

12 December 2020

Metal Activation of Enzymes in Nucleic Acid Biochemistry

1 reference

12 December 2020

Hammerhead ribozymes with a faster cleavage rate

1 reference

12 December 2020

Importance of specific guanosine N7-nitrogens and purine amino groups for efficient cleavage by a hammerhead ribozyme

1 reference

12 December 2020

A unique mechanism for RNA catalysis: the role of metal cofactors in hairpin ribozyme cleavage

1 reference

12 December 2020

A single adenosine with a neutral pKa in the ribosomal peptidyl transferase center

1 reference

12 December 2020

Dependence of tRNA structure in solution upon ionic condition of the solvent. Fluorescence studies of monovalent cation binding to tRNAPhe from barley embryos

1 reference

12 December 2020

Tertiary Structure of tRNAPhe (Yeast): Kinetics and Electrostatic Repulsion

1 reference

12 December 2020

Synthesis and chemical properties of monomers and polymers containing 7-methylguanine and an investigation of their substrate or template properties for bacterial deoxyribonucleic acid or ribonucleic acid polymerases

1 reference

12 December 2020

An unusual pH-independent and metal-ion-independent mechanism for hairpin ribozyme catalysis

1 reference

12 December 2020

Cobalt hexammine inhibition of the hammerhead ribozyme

1 reference

12 December 2020

Probing the binding of Tb(III) and Eu(III) to the hammerhead ribozyme using luminescence spectroscopy

1 reference

12 December 2020

Hammerhead cleavage of the phosphorodithioate linkage

1 reference

12 December 2020

Folding of an mRNA Pseudoknot Required for Stop Codon Readthrough: Effects of Mono- and Divalent Ions on Stability

1 reference

12 December 2020

Activities and relative affinities of divalent metals in unmodified and phosphorothioate-substituted hammerhead ribozymes

1 reference

12 December 2020

Evidence for the role of solvated metal hydroxide in the hammerhead cleavage mechanism

1 reference

12 December 2020

10.1017/S1355838201002357

Identifiers

DOI

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6 July 2017

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6 July 2017

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