PIC: Protein Interactions Calculator (Q28315177)

From Wikidata

Jump to navigation Jump to search

scientific article (publication date: July 2007)

edit

Language	Label	Description	Also known as
English	PIC: Protein Interactions Calculator	scientific article (publication date: July 2007)

Statements

instance of

scholarly article

0 references

title

PIC: Protein Interactions Calculator (English)

0 references

author name string

K G Tina

series ordinal

1

0 references

R Bhadra

series ordinal

2

0 references

N Srinivasan

series ordinal

3

0 references

language of work or name

English

0 references

publication date

July 2007

0 references

published in

Nucleic Acids Research

0 references

volume

35

0 references

issue

Web Server issue

0 references

page(s)

W473-6

0 references

cites work

Crystallographic and Mutational Studies of Mycobacterium tuberculosis recA Mini-inteins Suggest a Pivotal Role for a Highly Conserved Aspartate Residue

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

20 March 2017

Interaction preferences across protein-protein interfaces of obligatory and non-obligatory components are different

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

20 March 2017

Diversity of protein-protein interactions

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

20 March 2017

Analysing six types of protein-protein interfaces

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

20 March 2017

The structural basis for specificity of substrate and recruitment peptides for cyclin-dependent kinases

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

20 March 2017

SETOR: hardware-lighted three-dimensional solid model representations of macromolecules

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

20 March 2017

Comparative protein modelling by satisfaction of spatial restraints

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

20 March 2017

RASMOL: biomolecular graphics for all

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

7 April 2017

Aromatic-aromatic interaction: a mechanism of protein structure stabilization

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

7 April 2017

Water structure of a hydrophobic protein at atomic resolution: Pentagon rings of water molecules in crystals of crambin

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Three-dimensional structure of the water-insoluble protein crambin in dodecylphosphocholine micelles and its minimal solvent-exposed surface

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Sequence determinants of a conformational switch in a protein structure.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Interaction of DNA with clusters of amino acids in proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Inter-residue interactions in protein folding and stability

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Structural modes of stabilization of permissive phosphorylation sites in protein kinases: distinct strategies in Ser/Thr and Tyr kinases

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Conserved spatially interacting motifs of protein superfamilies: application to fold recognition and function annotation of genome data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

NCI: A server to identify non-canonical interactions in protein structures.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Atom depth as a descriptor of the protein interior

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Integration of related sequences with protein three-dimensional structural families in an updated version of PALI database.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Electrostatic contributions to T4 lysozyme stability: solvent-exposed charges versus semi-buried salt bridges

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Common fold in helix-hairpin-helix proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Residue depth: a novel parameter for the analysis of protein structure and stability.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

JOY: protein sequence-structure representation and analysis.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Recognition of protein structure on coarse lattices with residue-residue energy functions

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Structural features can be unconserved in proteins with similar folds. An analysis of side-chain to side-chain contacts secondary structure and accessibility.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

Protein-protein interactions: a review of protein dimer structures

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

29 September 2017

A dissection of specific and non-specific protein-protein interfaces

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

27 November 2018

Conservation helps to identify biologically relevant crystal contacts

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

27 November 2018

Ion-pairs in proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

27 November 2018

Tertiary structural constraints on protein evolutionary diversity: templates, key residues and structure prediction

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933215

retrieved

27 November 2018

Interaction geometry involving planar groups in protein-protein interfaces

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17584791

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tolerance to the substitution of buried apolar residues by charged residues in the homologous protein structures

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17584791

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interaction interfaces of protein domains are not topologically equivalent across families within superfamilies: Implications for metabolic and signaling pathways

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17584791

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stereochemical modeling of disulfide bridges. Criteria for introduction into proteins by site-directed mutagenesis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17584791

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKM423

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

590175

DBLP publication ID

journals/nar/TinaBS07

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

OpenCitations bibliographic resource ID

590175

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

590175

PMC publication ID

1933215

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

590175

PubMed publication ID

17584791

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

590175

ResearchGate publication ID

6252172

0 references

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q28315177&oldid=1399205192"