Systematic chromosomal deletion of bacterial ribosomal protein genes (Q28249040)

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13 February 2020

title

Systematic chromosomal deletion of bacterial ribosomal protein genes (English)

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13 February 2020

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13 February 2020

Shinichiro Shoji

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13 February 2020

Corey M Dambacher

series ordinal

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13 February 2020

Zahra Shajani

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13 February 2020

Peter G Schultz

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13 February 2020

language of work or name

English

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publication date

12 September 2011

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Journal of Molecular Biology

13 February 2020

published in

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13 February 2020

volume

413

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13 February 2020

issue

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13 February 2020

page(s)

751-761

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Evolution of protein synthesis from an RNA world

13 February 2020

cites work

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Encoding multiple unnatural amino acids via evolution of a quadruplet-decoding ribosome

20 March 2017

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The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA

20 March 2017

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The Structure of the Ribosome with Elongation Factor G Trapped in the Posttranslocational State

20 March 2017

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Recombineering: a homologous recombination-based method of genetic engineering

20 March 2017

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Ribosome biogenesis and the translation process in Escherichia coli

20 March 2017

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Structure of the 70S ribosome complexed with mRNA and tRNA

20 March 2017

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Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

20 March 2017

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An expanded genetic code with a functional quadruplet codon

20 March 2017

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Expanding the genetic code of Escherichia coli

20 March 2017

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Structure of the 30S ribosomal subunit

20 March 2017

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The structural basis of ribosome activity in peptide bond synthesis

20 March 2017

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The complete atomic structure of the large ribosomal subunit at 2.4 A resolution

20 March 2017

1 reference

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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

20 March 2017

1 reference

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Molecular signatures of ribosomal evolution

20 March 2017

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A flexible loop in yeast ribosomal protein L11 coordinates P-site tRNA binding

20 March 2017

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Slowing bacterial translation speed enhances eukaryotic protein folding efficiency

29 September 2017

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What recent ribosome structures have revealed about the mechanism of translation

29 September 2017

1 reference

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A dominant negative mutant of the E. coli RNA helicase DbpA blocks assembly of the 50S ribosomal subunit

29 September 2017

1 reference

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A complex assembly landscape for the 30S ribosomal subunit

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Crawling out of the RNA world

29 September 2017

1 reference

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A hierarchical model for evolution of 23S ribosomal RNA.

29 September 2017

1 reference

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Novel mutations in ribosomal proteins L4 and L22 that confer erythromycin resistance in Escherichia coli

29 September 2017

1 reference

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Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli

29 September 2017

1 reference

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How ribosomes make peptide bonds

29 September 2017

1 reference

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Crystal structure of a 70S ribosome-tRNA complex reveals functional interactions and rearrangements

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Structural insights into translational fidelity

29 September 2017

1 reference

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Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

mRNA helicase activity of the ribosome

29 September 2017

1 reference

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Creating ribosomes with an all-RNA 30S subunit P site

29 September 2017

1 reference

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Systematic mutagenesis of the Escherichia coli genome

29 September 2017

1 reference

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PHENOTYPIC REPAIR BY STREPTOMYCIN OF DEFECTIVE GENOTYPES IN E. COLI

29 September 2017

1 reference

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Selection for Escherichia coli mutants with proteins missing from the ribosome

29 September 2017

1 reference

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Mutational alterations in 50 proteins of the Escherichia coli ribosome

29 September 2017

1 reference

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Mutations affecting the structural genes and the genes coding for modifying enzymes for ribosomal proteins in Escherichia coli

29 September 2017

1 reference

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Role of ribosomal protein S12 in peptide chain elongation: analysis of pleiotropic, streptomycin-resistant mutants of Escherichia coli

29 September 2017

1 reference

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Quantitative proteomic analysis of ribosome assembly and turnover in vivo

29 September 2017

1 reference

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Hyperaccurate and error-prone ribosomes exploit distinct mechanisms during tRNA selection

2 June 2018

1 reference

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Quantitative analysis of isotope distributions in proteomic mass spectrometry using least-squares Fourier transform convolution

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

A protein component at the heart of an RNA machine: the importance of protein l27 for the function of the bacterial ribosome

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Structural basis for the function of the ribosomal L7/12 stalk in factor binding and GTPase activation

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Identification and functional characterization of the protein controlled by the streptomycin-resistant locus in E. coli

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

A mutant from Escherichia coli which lacks ribosomal proteins S17 and L29 used to localize these two proteins on the ribosomal surface.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Incorporation of six additional proteins to complete the assembly map of the 50 S subunit from Escherichia coli ribosomes.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Structural rearrangements of the ribosome at the tRNA proofreading step

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

An enhanced system for unnatural amino acid mutagenesis in E. coli

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Evolved orthogonal ribosomes enhance the efficiency of synthetic genetic code expansion.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Ribosomal Proteins S12 and S13 Function as Control Elements for Translocation of the mRNA:tRNA Complex

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

Ribosomal protein L27 participates in both 50 S subunit assembly and the peptidyl transferase reaction

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3694390

A mutation suppressing streptomycin dependence. I. An effect on ribosome function

27 November 2018

1 reference

12 December 2020

Reversion of a streptomycin-dependent strain ofEscherichia coli

1 reference

12 December 2020

Ribosomal protein L20 can replace the assembly-initiator protein L24 at low temperatures

1 reference

12 December 2020

Coupling of ribosomal L1 stalk and tRNA dynamics during translation elongation

1 reference

12 December 2020

10.1016/J.JMB.2011.09.004

Identifiers

DOI

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13 February 2020

1 reference

2 references

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13 February 2020

PubMed publication ID

21945294

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21945294%20AND%20SRC:MED&resulttype=core&format=json