Pages that link to "Q36633176"
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The following pages link to Towards a molecular dynamics consensus view of B-DNA flexibility (Q36633176):
Displaying 50 items.
- The role of methylation in the intrinsic dynamics of B- and Z-DNA (Q21134614) (← links)
- Molecular dynamics simulations: advances and applications (Q26775869) (← links)
- Assessing the Current State of Amber Force Field Modifications for DNA (Q27301352) (← links)
- Control of DNA minor groove width and Fis protein binding by the purine 2-amino group (Q27678077) (← links)
- The intrinsic mechanics of B-DNA in solution characterized by NMR (Q28834499) (← links)
- Heat conductivity of DNA double helix (Q30406566) (← links)
- In the absence of writhe, DNA relieves torsional stress with localized, sequence-dependent structural failure to preserve B-form (Q30490893) (← links)
- Intrinsic flexibility of B-DNA: the experimental TRX scale (Q30493018) (← links)
- Recovery of the poisoned topoisomerase II for DNA religation: coordinated motion of the cleavage core revealed with the microsecond atomistic simulation. (Q30661486) (← links)
- Structure, Stiffness and Substates of the Dickerson-Drew Dodecamer. (Q30663429) (← links)
- A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA. (Q33566434) (← links)
- Physical properties of naked DNA influence nucleosome positioning and correlate with transcription start and termination sites in yeast (Q34043829) (← links)
- Toward a consensus view of duplex RNA flexibility (Q34134724) (← links)
- Direct measurement of the dielectric polarization properties of DNA. (Q34144701) (← links)
- Right-handed double-helix ultrashort DNA yields chiral nematic phases with both right- and left-handed director twist (Q34199780) (← links)
- Unraveling the sequence-dependent polymorphic behavior of d(CpG) steps in B-DNA (Q34312985) (← links)
- Structure-based modeling of protein: DNA specificity (Q34448872) (← links)
- μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA (Q34510040) (← links)
- NAFlex: a web server for the study of nucleic acid flexibility. (Q34728020) (← links)
- Atomistic account of structural and dynamical changes induced by small binders in the double helix of a short DNA. (Q35182375) (← links)
- Simple Elastic Network Models for Exhaustive Analysis of Long Double-Stranded DNA Dynamics with Sequence Geometry Dependence (Q35857012) (← links)
- Simulations Meet Experiment to Reveal New Insights into DNA Intrinsic Mechanics. (Q35866373) (← links)
- Revisiting the Anomalous Bending Elasticity of Sharply Bent DNA (Q36363476) (← links)
- Parmbsc1: a refined force field for DNA simulations (Q36428161) (← links)
- Refinement of Generalized Born Implicit Solvation Parameters for Nucleic Acids and Their Complexes with Proteins. (Q36722284) (← links)
- Bullied no more: when and how DNA shoves proteins around (Q36900710) (← links)
- Stability and kinetics of G-quadruplex structures (Q36909305) (← links)
- Understanding nucleic acid structural changes by comparing wide-angle x-ray scattering (WAXS) experiments to molecular dynamics simulations (Q36944868) (← links)
- Translocation and deletion breakpoints in cancer genomes are associated with potential non-B DNA-forming sequences (Q37076289) (← links)
- Theoretical studies of RNA catalysis: hybrid QM/MM methods and their comparison with MD and QM. (Q37366654) (← links)
- Long-range correlations in the mechanics of small DNA circles under topological stress revealed by multi-scale simulation (Q37401128) (← links)
- Modeling and Analysis of Intercalant Effects on Circular DNA Conformation (Q37418295) (← links)
- Free energy calculation of modified base-pair formation in explicit solvent: A predictive model (Q37426610) (← links)
- Sequence selectivity of the cleavage sites induced by topoisomerase I inhibitors: a molecular dynamics study (Q37528750) (← links)
- Frontiers in Molecular Dynamics Simulations of DNA (Q37914843) (← links)
- Small DNA circles as probes of DNA topology (Q38091480) (← links)
- Dynamic hydrogen bonding and DNA flexibility in minor groove binders: molecular dynamics simulation of the polyamide f-ImPyIm bound to the Mlu1 (MCB) sequence 5'-ACGCGT-3' in 2:1 motif (Q38300869) (← links)
- Molecular modeling of nucleic Acid structure: setup and analysis (Q38326721) (← links)
- Evaluation of DNA Force Fields in Implicit Solvation (Q38848165) (← links)
- Molecular dynamics simulation studies for DNA sequence recognition by reactive metabolites of anticancer compounds (Q39032493) (← links)
- Fuzziness and noise in nucleosomal architecture (Q39094607) (← links)
- The structural impact of DNA mismatches (Q40176435) (← links)
- Hybrid simulation approach incorporating microscopic interaction along with rigid body degrees of freedom for stacking between base pairs (Q40282451) (← links)
- Measuring shape-dependent looping probability of DNA. (Q40495923) (← links)
- Extensive molecular dynamics simulations showing that canonical G8 and protonated A38H+ forms are most consistent with crystal structures of hairpin ribozyme (Q40623105) (← links)
- Mechanical properties of symmetric and asymmetric DNA A-tracts: implications for looping and nucleosome positioning. (Q41002145) (← links)
- Features of genomic organization in a nucleotide-resolution molecular model of the Escherichia coli chromosome (Q41510951) (← links)
- Molecular dynamics and quantum mechanics of RNA: conformational and chemical change we can believe in (Q41915155) (← links)
- Long-timescale dynamics of the Drew-Dickerson dodecamer. (Q41931128) (← links)
- Impact of methylation on the physical properties of DNA. (Q42143339) (← links)