A plant virus replication system to assay the formation of RNA pseudotriloop motifs in RNA-protein interactions (Q27486213)

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scientific article (publication date: 28 October 2003)

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English	A plant virus replication system to assay the formation of RNA pseudotriloop motifs in RNA-protein interactions	scientific article (publication date: 28 October 2003)

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

title

A plant virus replication system to assay the formation of RNA pseudotriloop motifs in RNA-protein interactions (English)

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stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

main subject

plant virus

1 reference

based on heuristic

inferred from title

author

René C. L. Olsthoorn

series ordinal

3

1 reference

stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

author name string

P C Joost Haasnoot

series ordinal

1

1 reference

stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

John F Bol

series ordinal

2

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stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

language of work or name

English

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publication date

20 October 2003

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stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

number of pages

5

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published in

Proceedings of the National Academy of Sciences of the United States of America

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stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

volume

100

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stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

issue

22

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Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

page(s)

12596-12600

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stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

cites work

The apical stem-loop of the hepatitis B virus encapsidation signal folds into a stable tri-loop with two underlying pyrimidine bulges

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

20 March 2017

Molecular recognition of pyr mRNA by the Bacillus subtilis attenuation regulatory protein PyrR

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

20 March 2017

Structures of two RNA domains essential for hepatitis C virus internal ribosome entry site function

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

20 March 2017

A potential RNA drug target in the hepatitis C virus internal ribosomal entry site

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

20 March 2017

Structure and dynamics of the iron responsive element RNA: implications for binding of the RNA by iron regulatory binding proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

20 March 2017

Role of the alfalfa mosaic virus methyltransferase-like domain in negative-strand RNA synthesis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

Pregenomic RNA is required for efficient incorporation of pol polyprotein into foamy virus capsids

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

Mutational analysis of the 5' leader region of simian foamy virus type 1.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

The European small subunit ribosomal RNA database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

RNA-protein complexes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

Alfalfa mosaic virus and ilarviruses: involvement of coat protein in multiple steps of the replication cycle

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

A model of the iron responsive element RNA hairpin loop structure determined from NMR and thermodynamic data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

Structure and function of the human immunodeficiency virus leader RNA.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

Early and late functions of alfalfa mosaic virus coat protein can be mutated separately

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

The importance of a single G in the hairpin loop of the iron responsive element (IRE) in ferritin mRNA for structure: an NMR spectroscopy study

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

The encapsidation signal on the hepatitis B virus RNA pregenome forms a stem-loop structure that is critical for its function

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

An RNA stem-loop structure directs hepatitis B virus genomic RNA encapsidation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

trans activation of human immunodeficiency virus type 1 is sequence specific for both the single-stranded bulge and loop of the trans-acting-responsive hairpin: a quantitative analysis.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

Structural analysis of the 5' domain of the HeLa 18S ribosomal RNA by chemical and enzymatic probing

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

An experimental study ofSaccharomyces cerevisiaeU3 snRNA conformation in solution

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

29 September 2017

A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

The Brome mosaic virus subgenomic promoter hairpin is structurally similar to the iron-responsive element and functionally equivalent to the minus-strand core promoter stem-loop C.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

Fitting peptides into the RNA world

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

A conserved hairpin structure in Alfamovirus and Bromovirus subgenomic promoters is required for efficient RNA synthesis in vitro.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

Internal loop/bulge and hairpin loop of the iron-responsive element of ferritin mRNA contribute to maximal iron regulatory protein 2 binding and translational regulation in the iso-iron-responsive element/iso-iron regulatory protein family

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

A conformational switch at the 3' end of a plant virus RNA regulates viral replication.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

Characterization of sequences controlling the synthesis of alfalfa mosaic virus subgenomic RNA in vivo

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

HIV-1 tat trans-activation requires the loop sequence within tar.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

Replication of an incomplete alfalfa mosaic virus genome in plants transformed with viral replicase genes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=240663

retrieved

2 June 2018

Role of the alfalfa mosaic virus movement protein and coat protein in virus transport

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1073%2FPNAS.2135413100

retrieved

21 January 2018

Structural features of an RNA containing the CUGGGA loop of the human immunodeficiency virus type 1 trans-activation response element

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1073%2FPNAS.2135413100

retrieved

21 January 2018

An NMR study of the HIV-1 TAR element hairpin

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1073%2FPNAS.2135413100

retrieved

21 January 2018

Specific HIV-1 TAR RNA loop sequence and functional groups are required for human cyclin T1-Tat-TAR ternary complex formation

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1073%2FPNAS.2135413100

retrieved

21 January 2018

An mRNA loop/bulge in the ferritin iron-responsive element forms in vivo and Was detected by radical probing with Cu-1,10-phenantholine and iron regulatory protein footprinting

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1073%2FPNAS.2135413100

retrieved

21 January 2018

The lonepair triloop: a new motif in RNA structure

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1073%2FPNAS.2135413100

retrieved

21 January 2018

Optimal sequence and structure of iron-responsive elements. Selection of RNA stem-loops with high affinity for iron regulatory factor

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/14569004

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1073/PNAS.2135413100

1 reference

stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

ADS bibcode

2003PNAS..10012596H

0 references

PMC publication ID

240663

1 reference

stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

PubMed publication ID

14569004

1 reference

stated in

Europe PubMed Central

PMC publication ID

240663

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14569004%20AND%20SRC:MED&resulttype=core&format=json

retrieved

20 December 2019

ResearchGate publication ID

231584335

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