(Q36845893)

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Genetic characterization of human immunodeficiency virus type 1 in elite controllers: lack of gross genetic defects or common amino acid changes

scientific article published on 18 June 2008

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Europe PubMed Central

PMC publication ID

16 August 2017

Genetic characterization of human immunodeficiency virus type 1 in elite controllers: lack of gross genetic defects or common amino acid changes (English)

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Europe PubMed Central

PMC publication ID

16 August 2017

Mark A. Brockman

2

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16 August 2017

Chanson J Brumme

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Chanson J Brumme

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Zabrina L Brumme

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Zabrina L Brumme

4

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Bruce D. Walker

18

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Bruce D Walker

1 reference

Europe PubMed Central

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16 August 2017

Florencia Pereyra

6

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Florencia Pereyra

1 reference

Europe PubMed Central

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16 August 2017

Alicja Piechocka-Trocha

7

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Alicja Trocha

1 reference

Europe PubMed Central

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16 August 2017

David Heckerman

16

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David Heckerman

1 reference

Europe PubMed Central

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16 August 2017

17

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Todd M Allen

1 reference

Europe PubMed Central

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16 August 2017

8

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Marylyn M Addo

1 reference

Europe PubMed Central

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16 August 2017

9

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Brian L Block

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Europe PubMed Central

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16 August 2017

Alissa Rothchild

10

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Alissa C Rothchild

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Europe PubMed Central

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16 August 2017

Toshiyuki Miura

1

object named as

Toshiyuki Miura

1 reference

Europe PubMed Central

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16 August 2017

Arne Schneidewind

13

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Arne Schneidewind

1 reference

Europe PubMed Central

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16 August 2017

15

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Yaoyu E Wang

1 reference

Europe PubMed Central

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16 August 2017

author name string

Jonathan M Carlson

5

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Europe PubMed Central

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16 August 2017

Brett M Baker

11

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Europe PubMed Central

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16 August 2017

Theresa Flynn

12

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Europe PubMed Central

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16 August 2017

Bin Li

14

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16 August 2017

language of work or name

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publication date

18 June 2008

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16 August 2017

Journal of Virology

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16 August 2017

82

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Europe PubMed Central

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16 August 2017

17

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

8422-8430

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Genetic and immunologic heterogeneity among persons who control HIV infection in the absence of therapy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Human immunodeficiency virus controllers: mechanisms of durable virus control in the absence of antiretroviral therapy

1 reference

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29 September 2017

Escape from the dominant HLA-B27-restricted cytotoxic T-lymphocyte response in Gag is associated with a dramatic reduction in human immunodeficiency virus type 1 replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Evidence of differential HLA class I-mediated viral evolution in functional and accessory/regulatory genes of HIV-1

1 reference

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29 September 2017

Leveraging hierarchical population structure in discrete association studies

1 reference

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29 September 2017

An HIV vaccine--evolving concepts

1 reference

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29 September 2017

Human immunodeficiency virus type 1 V1-V2 envelope loop sequences expand and add glycosylation sites over the course of infection, and these modifications affect antibody neutralization sensitivity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

HIV VprR77Q mutation does not influence clinical response of individuals initiating highly active antiretroviral therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Maintenance of viral suppression in HIV-1-infected HLA-B*57+ elite suppressors despite CTL escape mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Neutralizing antibodies do not mediate suppression of human immunodeficiency virus type 1 in elite suppressors or selection of plasma virus variants in patients on highly active antiretroviral therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Vpr and HIV-1 disease progression: R77Q mutation is associated with long-term control of HIV-1 infection in different groups of patients

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Phenotypic, functional, and kinetic parameters associated with apparent T-cell control of human immunodeficiency virus replication in individuals with and without antiretroviral treatment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Use of a novel GFP reporter cell line to examine replication capacity of CXCR4- and CCR5-tropic HIV-1 by flow cytometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

The influence of CCL3L1 gene-containing segmental duplications on HIV-1/AIDS susceptibility

1 reference

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29 September 2017

Consistent cytotoxic-T-lymphocyte targeting of immunodominant regions in human immunodeficiency virus across multiple ethnicities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Improved coreceptor usage prediction and genotypic monitoring of R5-to-X4 transition by motif analysis of human immunodeficiency virus type 1 env V3 loop sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Statistical significance for genomewide studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Vpr R77Q is associated with long-term nonprogressive HIV infection and impaired induction of apoptosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Inhibition of human immunodeficiency virus type 1 (HIV-1) replication by a two-amino-acid insertion in HIV-1 Vif from a nonprogressing mother and child

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Structure--function relationships in HIV-1 Nef.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Genetic restriction of HIV-1 pathogenesis to AIDS by promoter alleles of IL10.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Characterization of human immunodeficiency virus type 1 vif gene in long-term asymptomatic individuals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Unusual polymorphisms in human immunodeficiency virus type 1 associated with nonprogressive infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

HIV-1-trans-activating (Tat) protein: both a target and a tool in therapeutic approaches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Sequence variations in human immunodeficiency virus type 1 Nef are associated with different stages of disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

CXCR4 and CCR5 genetic polymorphisms in long-term nonprogressive human immunodeficiency virus infection: lack of association with mutations other than CCR5-Delta32

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

In vivo sequence variability of human immunodeficiency virus type 1 envelope gp120: association of V2 extension with slow disease progression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

High frequency of defective nef alleles in a long-term survivor with nonprogressive human immunodeficiency virus type 1 infection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Characterization of nef sequences in long-term survivors of human immunodeficiency virus type 1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Brief report: absence of intact nef sequences in a long-term survivor with nonprogressive HIV-1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Virologic and immunologic characterization of long-term survivors of human immunodeficiency virus type 1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Biological characterization of nef in long-term survivors of human immunodeficiency virus type 1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

29 September 2017

Genomic structure of an attenuated quasi species of HIV-1 from a blood transfusion donor and recipients

1 reference

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29 September 2017

Definition of the human immunodeficiency virus type 1 Rev and human T-cell leukemia virus type I Rex protein activation domain by functional exchange

1 reference

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29 September 2017

Novel cytotoxic T-lymphocyte escape mutation by a three-amino-acid insertion in the human immunodeficiency virus type 1 p6Pol and p6Gag late domain associated with drug resistance

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

27 June 2018

Isolation and characterization of replication-competent human immunodeficiency virus type 1 from a subset of elite suppressors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

27 June 2018

Defective nef alleles in a cohort of hemophiliacs with progressing and nonprogressing HIV-1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

27 June 2018

HIV-1 nef mutations and clinical long-term nonprogression. A molecular epidemiology study.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

27 June 2018

Even individuals considered as long-term nonprogressors show biological signs of progression after 10 years of human immunodeficiency virus infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

27 June 2018

Increased sequence diversity coverage improves detection of HIV-specific T cell responses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

CCL3L1 and CCR5 influence cell-mediated immunity and affect HIV-AIDS pathogenesis via viral entry-independent mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

Analysis of insertions and deletions in the gag p6 region of diverse HIV type 1 strains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

HIV-1 Nef is preferentially recognized by CD8 T cells in primary HIV-1 infection despite a relatively high degree of genetic diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

Differences in disease progression in a cohort of long-term non-progressors after more than 16 years of HIV-1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

Long-term nonprogressive infection with human immunodeficiency virus type 1 in a hemophilia cohort

1 reference

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5 September 2018

Chemokine receptor polymorphisms and human immunodeficiency virus disease progression

1 reference

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5 September 2018

Longitudinal quantification of human immunodeficiency virus type 1 DNA and RNA in long-term nonprogressors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

In vitro replication kinetics of human immunodeficiency virus type 1 (HIV-1) variants in relation to virus load in long-term survivors of HIV-1 infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

How many HIV-infected individuals may be defined as long-term nonprogressors? A report from the Italian Seroconversion Study. Italian Seroconversion Study Group (ISS)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

Cytotoxic T lymphocytes in asymptomatic long-term nonprogressing HIV-1 infection. Breadth and specificity of the response and relation to in vivo viral quasispecies in a person with prolonged infection and low viral load.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

Studies in subjects with long-term nonprogressive human immunodeficiency virus infection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

5 September 2018

Is the Vpr R77Q mutation associated with long-term non-progression of HIV infection?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

20 October 2018

Founder Effects in the Assessment of HIV Polymorphisms and HLA Allele Associations

1 reference

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4 December 2018

CD8+ T-cell responses to different HIV proteins have discordant associations with viral load

1 reference

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4 December 2018

Gene Defects Clustered at the C-Terminus of the vpr Gene of HIV-1 in Long-Term Nonprogressing Mother and Child Pair:In VivoEvolution of vpr Quasispecies in Blood and Plasma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2519665

4 December 2018

HIV-1 strains from a cohort of American subjects reveal the presence of a V2 region extension unique to slow progressors and non-progressors

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of genetic polymorphisms in CCR5, CCR2, stromal cell-derived factor-1, RANTES, and dendritic cell-specific intercellular adhesion molecule-3-grabbing nonintegrin in seronegative individuals repeatedly exposed to HIV-1

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional dissection of the HIV-1 Rev trans-activator—Derivation of a trans-dominant repressor of Rev function

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Predictors of progression in long-term nonprogressors. Australian Long-Term Nonprogressor Study Group

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Neutralizing antibodies are positively associated with CD4+ T-cell counts and T-cell function in long-term AIDS-free infection

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Immunologic and virologic studies in long-term nonprogressors with HIV-1 infection

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crosscurrents in HIV-1 evolution

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Viral replication capacity as a correlate of HLA B57/B5801-associated nonprogressive HIV-1 infection

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HIV-specific CD8+ T cell proliferation is coupled to perforin expression and is maintained in nonprogressors

1 reference

https://pubmed.ncbi.nlm.nih.gov/18562530

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JVI.00535-08

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

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