(Q34169464)

31 July 2017

title

Landscape of genomic alterations in cervical carcinomas (English)

1 reference

31 July 2017

Kristian Cibulskis

0 references

Gad Getz

Gad Getz

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Chandra Sekhar Pedamallu

Chandra Sekhar Pedamallu

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Heidi Greulich

Heidi Greulich

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Camilla Krakstad

Camilla Krakstad

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Elizabeth Nickerson

Elizabeth Nickerson

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Samuel S Freeman

Samuel S Freeman

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Sandra Romero-Cordoba

Sandra Romero-Cordoba

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Mari K Halle

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Akinyemi I Ojesina

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Mara W Rosenberg

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Alfredo Hidalgo-Miranda

Alfredo Hidalgo-Miranda

0 references

Trevor J Pugh

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Matthew Meyerson

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Thomas E Carey

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Lars A Akslen

1 reference

31 July 2017

Stacey B Gabriel

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31 July 2017

Andrew D Cherniack

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31 July 2017

Helga B Salvesen

1 reference

31 July 2017

Olav Karsten Vintermyr

Olav K Vintermyr

1 reference

31 July 2017

Aaron McKenna

1 reference

31 July 2017

Chip Stewart

1 reference

31 July 2017

Erling A Hoivik

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31 July 2017

Lee Lichtenstein

1 reference

31 July 2017

Ivan Imaz-Rosshandler

1 reference

31 July 2017

Lauren Ambrogio

1 reference

31 July 2017

Bjørn Bertelsen

1 reference

31 July 2017

Victor Treviño

1 reference

31 July 2017

Karla Vazquez-Santillan

1 reference

31 July 2017

Alberto Salido Guadarrama

1 reference

31 July 2017

Alexi A Wright

1 reference

31 July 2017

Fujiko Duke

1 reference

31 July 2017

Bethany Kaplan

1 reference

31 July 2017

Rui Wang

1 reference

31 July 2017

Heather M Walline

1 reference

31 July 2017

Michael S Lawrence

1 reference

31 July 2017

Scott L Carter

1 reference

31 July 2017

Iram P Rodriguez-Sanchez

1 reference

31 July 2017

Magali Espinosa-Castilla

1 reference

31 July 2017

Kathrine Woie

1 reference

31 July 2017

Line Bjorge

1 reference

31 July 2017

Elisabeth Wik

1 reference

31 July 2017

Nayeli Belem Gabiño

1 reference

31 July 2017

Gabriela Sofia Gómez-Macías

1 reference

31 July 2017

Lezmes D Valdez-Chapa

1 reference

31 July 2017

María Lourdes Garza-Rodríguez

1 reference

31 July 2017

German Maytorena

1 reference

31 July 2017

Jorge Vazquez

1 reference

31 July 2017

Carlos Rodea

1 reference

31 July 2017

Adrian Cravioto

1 reference

31 July 2017

Maria L Cortes

1 reference

31 July 2017

Christopher P Crum

1 reference

31 July 2017

Donna S Neuberg

1 reference

31 July 2017

Claudia Rangel Escareno

1 reference

31 July 2017

Hugo A Barrera-Saldaña

1 reference

31 July 2017

Jorge Melendez-Zajgla

1 reference

31 July 2017

language of work or name

English

0 references

publication date

25 December 2013

1 reference

31 July 2017

1 reference

31 July 2017

volume

506

1 reference

31 July 2017

issue

7488

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31 July 2017

page(s)

371-375

1 reference

High-risk human papillomavirus detection in oropharyngeal, nasopharyngeal, and oral cavity cancers: comparison of multiple methods.

31 July 2017

cites work

1 reference

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The landscape of viral expression and host gene fusion and adaptation in human cancer

5 July 2018

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Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples

5 July 2018

1 reference

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Deciphering signatures of mutational processes operative in human cancer

5 July 2018

1 reference

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Differential analysis of gene regulation at transcript resolution with RNA-seq

5 July 2018

1 reference

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Activating HER2 mutations in HER2 gene amplification negative breast cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Exome sequencing of serous endometrial tumors identifies recurrent somatic mutations in chromatin-remodeling and ubiquitin ligase complex genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Comprehensive genomic characterization of squamous cell lung cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Functional analysis of receptor tyrosine kinase mutations in lung cancer identifies oncogenic extracellular domain mutations of ERBB2.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

A remarkably simple genome underlies highly malignant pediatric rhabdoid cancers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Non-random integration of the HPV genome in cervical cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Sequence analysis of mutations and translocations across breast cancer subtypes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

HLA DNA typing: past, present, and future

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Absolute quantification of somatic DNA alterations in human cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

The RAS/RAF/MEK/ERK and the PI3K/AKT signalling pathways: role in cancer pathogenesis and implications for therapeutic approaches.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Amplified genes may be overexpressed, unchanged, or downregulated in cervical cancer cell lines.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Genomic sequencing of colorectal adenocarcinomas identifies a recurrent VTI1A-TCF7L2 fusion

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

ContEst: estimating cross-contamination of human samples in next-generation sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Exome sequencing of head and neck squamous cell carcinoma reveals inactivating mutations in NOTCH1

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

The mutational landscape of head and neck squamous cell carcinoma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

PathSeq: software to identify or discover microbes by deep sequencing of human tissue

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

A framework for variation discovery and genotyping using next-generation DNA sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Initial genome sequencing and analysis of multiple myeloma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

The genomic complexity of primary human prostate cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

5 July 2018

Global cancer statistics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Integrative genomic approaches in cervical cancer: implications for molecular pathogenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Frequent genomic structural alterations at HPV insertion sites in cervical carcinoma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Interplay of bromodomain and histone acetylation in the regulation of p300-dependent genes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

ConsensusClusterPlus: a class discovery tool with confidence assessments and item tracking

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

A comprehensive catalogue of somatic mutations from a human cancer genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

The Sequence Alignment/Map format and SAMtools

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Fast and accurate short read alignment with Burrows-Wheeler transform

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Somatic LKB1 mutations promote cervical cancer progression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Papillomaviruses in the causation of human cancers - a brief historical account

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

The majority of viral-cellular fusion transcripts in cervical carcinomas cotranscribe cellular sequences of known or predicted genes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Inverse correlation between RASSF1A hypermethylation, KRAS and BRAF mutations in cervical adenocarcinoma

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Keap1 recruits Neh2 through binding to ETGE and DLG motifs: characterization of the two-site molecular recognition model

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

A mutation in the common docking domain of ERK2 in a human cancer cell line, which was associated with its constitutive phosphorylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Sensitive detection of human papillomavirus in cervical, head/neck, and schistosomiasis-associated bladder malignancies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Systematic review of genomic integration sites of human papillomavirus genomes in epithelial dysplasia and invasive cancer of the female lower genital tract

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

The WD repeat: a common architecture for diverse functions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Mechanisms of MHC class I--restricted antigen processing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Clonal p53 mutation in primary cervical cancer: association with human-papillomavirus-negative tumours

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

ErbB2 Activation of ESX gene expression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4161954

Impact of genomics on personalized cancer medicine

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24390348

12 December 2020

inferred from PubMed ID database lookup

Comparison of the f-HPV typing™ and Hybrid Capture II® assays for detection of high-risk HPV genotypes in cervical samples

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24390348

12 December 2020

inferred from PubMed ID database lookup

PIK3CA mutational status and overall survival in patients with cervical cancer treated with radical chemoradiotherapy

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24390348

12 December 2020

inferred from PubMed ID database lookup

Mutational heterogeneity in cancer and the search for new cancer-associated genes

1 reference

https://api.crossref.org/works/10.1038%2FNATURE12881

7 January 2021

Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing

1 reference

https://api.crossref.org/works/10.1038%2FNATURE12881

7 January 2021

Amylases in the Human Vagina

1 reference

https://api.crossref.org/works/10.1038%2FNATURE12881

7 January 2021

Retroviral restriction by APOBEC proteins

1 reference

https://api.crossref.org/works/10.1038%2FNATURE12881

7 January 2021

An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers

1 reference

https://api.crossref.org/works/10.1038%2FNATURE12881

7 January 2021

Identifiers

DOI

10.1038/NATURE12881

1 reference

31 July 2017

1 reference

31 July 2017

1 reference