Finding paths of interest in networks

Leveraging Heterogeneous Network Embedding for Metabolic Pathway Prediction

leADS: improved metabolic pathway inference based on active dataset subsampling

A pathologic file generator (PLFG) is implemented to assist and facilitate the curation progress of every computationally predicted pathway genome database (PGDB).

PAVER: Pathway Analysis Visualization with Embedding Representations

CHAP: Modeling Metabolic Pathways as Groups (with Augmentation)

A dockerfile for multiprocessing Pathway-Tools.

Singularity recipe for Pathway-Tools and mpwt.

Metabolic pathway inference using multi-label classification with rich pathway features

Pathway Tools multiprocessing wrapper (for PathoLogic).