Code to create polar sets for genome sketching.
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Updated
Jan 31, 2021 - Python
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minimizers
Here are 4 public repositories matching this topic...
Evaluation tools for "A performant bridge between fixed-size and variable-size seeding"
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Sep 22, 2020 - Python
Minimizer-based assembly scaffolding and mapping using long reads
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Oct 11, 2024 - Python
ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more
bioinformatics
taxonomy
bloom-filter
metagenomics
genbank
microbiome
k-mer
ncbi
refseq
minimizers
gtdb
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Updated
Feb 12, 2024 - Python
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