Final Project WS2019: Alexander Amberger, Matthias Gruber, Simone Zimmerl

"植物基因组"(plantgenomes)微信公众号

Supplementary data and pipelines for analyzing genome gene content data and morphology to create various phylogenies.

A Genome generation library, for all your genetic algorithmic needs.

The second part of https://github.com/npanuhin/BIOCAD

Constructing structures of evolutionary genomic relationships based on their local pairwise alignment

Classification model predicting the type of microbe from provided features

R code in R Markdown used for ucm genomes and genome analysis course

Generative art project using GAs and swarm mechanics curated as part of the Norman Rea Gallery's Virtually Real exhibition.

Randomly download genomes from NCBI RefSeq and Genbank

MAGset is a tool to analyze and compare MAGs of known species

🪛 Fetch ncbi metadata for sra and assemblies

Repository of assembled reference genomes of the green model alga Chlamydomonas reinhardtii including files optimised for visualisation in IGV

Supplementary repository for "Efficient and robust search of microbial genomes via Phylogenetic Compression"

read data generator

Genestrip - Efficient read classification, filtering and k-mer counting for selected groups of species

Tracks Eukaryotic genome annotations (gff) from NCBI and Ensembl

Arche: a functional-optimized annotator for microbial meta(genomes)

A selection of databases for Genestrip